Stutzerimonas chloritidismutans: LLJ08_00980
Help
Entry
LLJ08_00980 CDS
T07923
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LLJ08_00980 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pchl02022
]
LLJ08_00980 (algB)
Two-component system [BR:
pchl02022
]
NtrC family
KinB-AlgB (alginate production)
LLJ08_00980 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
cREC_REC
Mg_chelatase
AAA_16
AAA_2
AAA_22
HTH_17
nSTAND3
VpsR
Xre-like-HTH
MCM
AAA_19
IstB_IS21
HTH_23
Tnp_22_trimer
HTH_29
HTH_28
HTH_psq
DUF815
Motif
Other DBs
NCBI-ProteinID:
UEG61751
LinkDB
All DBs
Position
complement(193768..195114)
Genome browser
AA seq
448 aa
AA seq
DB search
MDQTTDNGGRILLVDDEAAILRTFRYCLEDRGYTVMTAASAAQAEAILQRQVFDLCFLDL
RLGEDNGLDVLQQMRLLAPWMRVVIVTAHSAVDTAVDAMQAGAADYLLKPCSPEQLRLSA
AKQLEVRQMAARLEALEGEMKQRSDALGSHSPSMMAVLETARQVADTDANILILGESGTG
KGELARAIHTWSRRSKKAFVTINCPSLSADLMESELFGHNRGAFTGATESTLGRVNQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVREGKF
REDLLYRLNVITLNLPPMRERPEDVLTLAERFLASFVKNYGRPARGFSDAAVAALKTYRW
PGNVRELRNVVERASIICPQQMIEVSHLGLGEQVGSNAPRIGEPLSLEALEKAHIAGVLS
TSDTLDQAARILGIDASTLYRKRKQYGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaacgacggacaacggcggacgcatcctcctggtggatgacgaagcggcgatc
ctgcgtaccttccgttactgcctagaggaccgcggctacacggtcatgactgccgccagc
gcggcacaggccgaggccattctgcagcgtcaggtgttcgacctgtgcttcctcgacctg
agactcggcgaagacaacggcctggacgtactgcaacagatgcgcctgctcgcgccgtgg
atgcgcgtggtcatcgtcaccgcccattcggctgtcgacaccgccgtggacgccatgcag
gccggcgccgcggattacctgctcaagccatgcagcccggaacagctgcgcctgtccgcc
gccaagcagctggaagtccggcagatggcggcccgactggaagcgctggaaggcgagatg
aagcagcgcagcgacgccctcggttcgcacagcccgtcgatgatggccgtgctggaaacc
gcgcggcaggtggcagacaccgacgccaacatcctcatcctcggcgaatcgggcaccggc
aagggtgaattggctcgtgccattcatacctggagccggcgctcgaagaaggccttcgtc
accatcaactgcccgtcgctgtccgccgacctgatggaaagcgagctgttcggacacaac
cgcggcgccttcaccggcgcgacggagagcacgctgggccgggtcaaccaggccgacggc
ggcacgctgttcctcgacgagatcggtgatttcccgctggcgctgcaacccaagctgttg
cgtttcatccaggacaaggagtacgagcgggtcggcgacccggtcacccgccgcgccgat
gtgcgcatcctcgcggcgaccaacctgaacctcgaagaaatggtgcgcgagggcaagttc
cgcgaggacctgctgtatcgcctcaatgtcatcaccctcaacctgccgcccatgcgcgag
cgccccgaggacgtgctgaccctggctgaacgcttccttgcctcgttcgtgaagaactat
ggccggccagcgcgcggtttcagcgatgcggcggtggccgcactgaagacctaccgctgg
ccgggcaacgtgcgtgaactgcgcaacgtggtggagcgggcgagcatcatctgcccgcag
cagatgatcgaagtcagccacctcggactgggcgaacaggtaggcagcaacgcgccacgc
atcggtgagccgctcagcctggaggcgctggagaaagcccatatcgccggcgtgctgagc
accagtgacaccctggatcaagcagcgcgcatcctgggtatcgatgcctcgaccctctac
cgaaaacgcaagcagtacggcctatga
DBGET
integrated database retrieval system
