Stutzerimonas chloritidismutans: LLJ08_01095
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Entry
LLJ08_01095 CDS
T07923
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LLJ08_01095 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_01095 (recD)
Enzymes [BR:
pchl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LLJ08_01095 (recD)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LLJ08_01095 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
NAT10_TcmA_helicase
AAA_22
SLFN-g3_helicase
UvrD_C
nSTAND3
AAA_16
CbiA
AAA_28
DEAD
nSTAND_NTPase5
Flavi_DEAD
DUF87
ATPase
T2SSE
Motif
Other DBs
NCBI-ProteinID:
UEG61774
LinkDB
All DBs
Position
227957..229804
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AA seq
615 aa
AA seq
DB search
MTLADLPLGPLERAFVASLQRLDPHASEPVLLAAALCCEVLSSGDVCLPLGRLAGKRPWP
DQDFSLPPLATWRAQLNASSLIGAPGDYAPLILVGERLYLARYQAYEQQLAEQLLARAAD
APDVDEAQLSDSLARLFAFNQQSPDWQRLAAAQAVRRRLAVISGGPGTGKTTTVVRLLAA
LLEQPGGERLAIGLAAPTGKAAARMAEAIRNAKADLPVSDAVKDALPDEARTLHRLLGSR
GDSPKVRHDAAHPLALDVLVVDEASMVDLALMAKLVAALPPKARLILLGDKDQLAAVEAG
AVFAELCEGRGFDSQAATDLQRITGQAVPVETPRSRLGDAVVLLTHSHRFAGDSGIGELA
RRINGGDAKGTIALLQEGRADLAWNATPTSAALIERLEQGYSPYLQAARQGDPEAAFEAF
NGFRALTAQREGAFGVTGINEALEARFKRRLGVPARERWYPGRAVMVRQNDYALGLFNGD
IGLCLKTEQGLRVFFEGDEGYRGFAPARLPSHDSAFAMTVHKSQGSEFTEVLLALPEQPS
PLLTRSLFYTGITRAKRKVEIWALPARLAEAVNTRAERAAGLAERLALPCAQTRATEAVP
EAKPDEPKSDQLSLF
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgacccttgccgatctgcccctcggcccactggagcgcgcctttgtcgccagcctgcag
cgcctcgacccgcatgcgtccgagccggtgctgctcgccgccgcgctgtgctgtgaagtc
ctgtcctccggcgacgtctgcctgccgctgggtcggttagccggcaagcggccatggccg
gatcaggatttcagcctgccgccgcttgcgacctggcgagcgcagctgaacgcctcatcg
ctgatcggtgcgccgggggattacgcaccgctgattctggtcggggaacggctctacctc
gcccgttaccaggcctatgaacagcagttggcggaacagctgctggctcgtgcagcggac
gcacccgatgtcgacgaggctcagctgagcgacagcctggcgcgcttgttcgccttcaat
cagcaaagccccgattggcagcgcctcgccgcggctcaggcggtacgccggcgactggca
gtgatctccggcggtcccggcaccggcaagaccaccactgtggtacgcctgctggcggcg
ttgctggagcagcccggcggcgaacgcctggccatcggcctcgccgcgcccaccggcaag
gccgcggcgcgcatggccgaagcgatccgcaacgccaaggccgatctgccggtcagcgat
gccgtcaaggacgccctgccggacgaggcgcgcacgctgcaccgcctgctcggcagccgc
ggtgacagcccgaaggtgcggcatgacgcggcccatccactggcgctggacgtgttggtg
gtggacgaggcatcgatggtcgacctggcactgatggccaagctggtcgccgcgctgccg
ccgaaggcgaggctgatcctgctcggcgacaaggaccagctggccgccgtggaagctggt
gcggtgttcgccgaactctgtgaagggcgcggtttcgatagtcaggccgcgaccgatctg
caacgcattaccgggcaggccgtaccggtcgagacgccgcgctcgcgcctcggcgatgcg
gttgtgctgctcacccacagccaccgcttcgccggcgacagcgggatcggcgagctggcg
cggcgaatcaatggtggcgatgccaagggcacgatcgcgctgctgcaggaagggcgcgcc
gatcttgcctggaatgccacgccaacgtccgccgcattgatcgagcgattggagcagggc
tattcgccttatctgcaggctgcacggcaaggcgatccggaggctgccttcgaggccttc
aacggcttccgcgcgctgactgcccagcgcgagggtgcctttggcgtcaccggcatcaac
gaggcgctggaagcgcggttcaagcgccgcctcggtgtgcccgcccgcgaacgctggtac
cccggccgcgcagtgatggtccggcagaacgactacgccctgggcctgttcaacggcgat
atcggcctgtgcttgaaaaccgagcagggcctgcgggtgttcttcgagggcgacgagggc
tatcgcggctttgccccggcacggttgccgagtcatgacagtgccttcgccatgaccgtg
cacaagagccagggctcggagttcaccgaggtgctgctggcgttgccggaacagcccagc
ccgctgctgacgcgctcgctgttctacaccggcatcacccgcgccaagcgcaaggtggag
atctgggcgctgccggcgcggctggccgaagcggtcaatacccgcgccgagcgcgccgca
ggactggccgagcgattggcgctcccctgcgctcagaccagagccacagaggcagtgccg
gaggccaagccagatgagccaaaaagcgatcagctcagcctgttctaa
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