Stutzerimonas chloritidismutans: LLJ08_04045
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Entry
LLJ08_04045 CDS
T07923
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pchl
Stutzerimonas chloritidismutans
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchl03016
]
LLJ08_04045 (truB)
Enzymes [BR:
pchl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LLJ08_04045 (truB)
Transfer RNA biogenesis [BR:
pchl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LLJ08_04045 (truB)
Prokaryotic type
LLJ08_04045 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UEG62326
LinkDB
All DBs
Position
885239..886156
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AA seq
305 aa
AA seq
DB search
MAQVKRVRRNVNGIILLDKPRGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKAYETVMQLGVTTTTADAEGEVLERKPVAVTVGQLEALLPQFRGDIL
QVPPMYSALKRDGQPLYKLARAGEVVEREPRSVNIARLELLSLDGDKARLAVACSKGTYI
RTLVEDIGQLLGCGAHVAELRRTQAGPFDLSQTVTLETLEQLHGEGGAEALDSLLQPVDS
GLEHWPLLQLSEHSAYYWLHGQPVRAPEAPKYGMVRVQDNNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggtcaagcgtgtacgccgtaacgtcaatggcatcatcctgctcgacaagccg
cgcgggttcacatccaatgctgcgttgcagaaggtccgctggttgctcaacgcggaaaaa
gctgggcataccggaagtctcgaccctcttgccactggtgtgttgccgctgtgttttggc
gaggccaccaagttctcgcagtaccttctggacgcggacaaggcctacgagacggtcatg
cagctgggggtcaccacgaccactgctgatgccgaaggtgaggttctggagcgcaagccg
gtagcggttaccgtcgggcagttggaggcactgttgccgcagtttcgcggtgacatcctg
caggtgccgccgatgtattcggcactcaagcgcgatggccagccgctgtacaaactggcg
cgtgccggagaggtggtggagcgcgagccgcgttctgttaatattgcgcgcttggagttg
ctctcgcttgacggcgacaaggcgcgactcgccgttgcatgcagcaaaggcacctatatc
cgcaccttggtcgaagacatcggccagttgctcggctgtggagcgcacgttgccgagctg
cggcgaacccaggccgggccgttcgacctgtcgcagacggtaacgctcgaaacgcttgag
cagttgcatggtgagggtggtgccgaggcgctggatagtctcttgcaaccggtggacagc
ggacttgagcattggccgttgttgcagctgtccgagcacagtgcctattactggctgcat
ggacaaccggtgcgggcgccagaagctcccaagtacggcatggttcgcgtacaggataac
aatggtcgcttcatcggcatcggtgaagtgagcgaagacgggcgcatcgcgccacgtcgg
ttgattcggtcggaatga
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