Stutzerimonas chloritidismutans: LLJ08_04055
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Entry
LLJ08_04055 CDS
T07923
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLJ08_04055 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchl03019
]
LLJ08_04055 (pnp)
03016 Transfer RNA biogenesis [BR:
pchl03016
]
LLJ08_04055 (pnp)
Enzymes [BR:
pchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LLJ08_04055 (pnp)
Messenger RNA biogenesis [BR:
pchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LLJ08_04055 (pnp)
Transfer RNA biogenesis [BR:
pchl03016
]
Prokaryotic type
tRNA degradation factors
LLJ08_04055 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
TraK_C
KH_2
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
UEG62328
LinkDB
All DBs
Position
886706..888811
Genome browser
AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKTADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREARPSEKETLTSRLIDRPIRPLFPEGFQNEVQVICTVVST
SKKTDPDIAAMIGTSAALAVSGIPFDGPIGAARVAFHPETGYLLNPNYDQLKASSLDMVV
AGTKDAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVEELAAEAGKPRWDWAAPQAN
TALLDAIRAEFGEAISQAYTITIKQDRYARLGELKDQVVAKFSGEEGQPSAGEVKDAFGE
IEYRTVRENIVNGKPRIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPYSVGECGRMGATGRREIGHGRLARRGVAAMLPSAD
EFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITEEIMEIALGQALEARLNILGQMNQ
VIAQSRSELSANAPTMLAMKIDQDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRVLGITAEAEIGKIYVGKIERIVDFGAFVNILPGKDGLVHISQISDQRI
EKVTDVLKEGQEVKVLVLDVDNRGRIKLSIKDVAAAEASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccggtaatcaagaagtttcaattcggtcagtcgaccgtaaccctggaaacgggt
cgtatcgctcgccaggcctccggcgcagtgctggtcaccgtcgatgacgacgtcaccgtg
ctggtaaccgtggtcggtgccaagaccgccgatccgagcaaggggttcttcccgctctcc
gtgcattaccaggagaagacctacgcagccggcaagatccctggcggcttcttcaagcgg
gaggcgcgtccttccgagaaggaaaccctgacctctcgcctgatcgatcgtccgatccgt
ccgctgtttccggaaggtttccagaacgaagtgcaggtcatttgtactgtcgtttccacc
agcaagaagactgatccggacatcgccgcgatgatcggtacttcggccgccctggctgtt
tccggtattccgttcgacggcccgatcggcgcggcacgcgtggccttccatccggaaacc
ggctacctgctgaacccgaactacgatcagctcaaggcctccagcctggacatggtcgtg
gccggcaccaaggacgccgtactgatggtcgagtcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccatgacgagttccaggccgtgatcaaggctgtc
gaagagctcgccgccgaagccggcaagccgcgttgggactgggctgctccgcaggccaac
accgcgttgctggatgccatccgtgccgagttcggcgaagccatctcccaggcctacacc
atcaccatcaagcaggaccgctacgcgcgcctgggtgagctgaaggaccaggtcgttgcc
aagttctccggtgaagaaggccagccgtctgccggcgaagtgaaggatgccttcggtgag
atcgaatatcgcaccgttcgcgagaacatcgtcaatggcaagccgcgcatcgacggtcgc
gacacccgtaccgttcgcgggctgaacatcgaagtcggcgtgctcgacaagacccacggt
tcggcactgttcacccgtggcgagacccaggccctggtcgttgcgaccctcggcactgcc
cgtgacgcgcagctgctcgacaccctggaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgtactcggtcggtgagtgtggtcgcatgggcgctaccggtcgccgc
gaaatcggccacggtcgcctggcccgtcgtggcgttgccgccatgctgccgagcgccgat
gaattcccgtacaccatccgtgtggtttccgagatcaccgagtctaacggttccagctcc
atggcatcggtctgtggtgcctcgctggcactgatggatgcgggcgtgccgatgaaggcg
ccggtagccggtatcgccatgggcctggtcaaggaaggagagaagtttgccgttctgacc
gacatcctcggtgacgaggaccacctgggcgacatggacttcaaggttgctggtaccgcc
aaaggcgtaaccgcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
gaaatcgctctgggccaggccctggaagcgcgcctgaacattctcggccagatgaaccag
gtcatcgcccagtcacgcagcgagctgtcggccaatgccccgaccatgctggcgatgaag
atcgaccaggacaagatccgtgacgtgatcggcaagggtggcgccaccattcgcgctatc
tgcgaggagaccaaggcctcgatcgacatcgaagacgatggctcgatcaagatcttcggc
gaaaccaaggaagcggcagaggcggccaagcagcgcgtactgggcatcaccgctgaagcc
gaaatcggcaagatctacgtcggcaagatcgagcgcatcgtcgacttcggcgcgttcgtc
aacatcctcccgggcaaggatggcctggtgcacatctcgcagatcagcgatcagcgtatc
gagaaagtcaccgatgtgctgaaagaaggtcaggaagtgaaggtgctggtgctggacgtg
gacaaccgcggccgtatcaagctctccatcaaggacgttgccgccgctgaagcctctggc
gtctga
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