Stutzerimonas chloritidismutans: LLJ08_05810
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Entry
LLJ08_05810 CDS
T07923
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pchl
Stutzerimonas chloritidismutans
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchl03021
]
LLJ08_05810 (rapA)
Transcription machinery [BR:
pchl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LLJ08_05810 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
ssDNA-exonuc_C
FlxA
Motif
Other DBs
NCBI-ProteinID:
UEG62653
LinkDB
All DBs
Position
complement(1255406..1258255)
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYLPGQRWISDSEAELGLGTILTQDGRMLTVLYPATGETRQYATRSAPLTRVRFVPG
DEITHFEGWKMTVREVDDVDGLLVYHGLTAQNEARTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLQHQSAQLQSSLWGLGGVRAQPIAHQLHIAKEVADRIAPRVLLADEVG
LGKTIEAGLIIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLEVALFDAERFIESDA
SNPFEDTQLALVSLEWLKEDERAQDAAFAAGWDVLVVDEAHHLVWHPEGASAEYKLVEQL
AEVIPGVLLLTATPEQLGLDSHFARLRLLDPNRFHDLDAFRAESSSYQPVAEAVQELLDE
GRLSQQAHQTIHDFLGAEGEALLAAATDGDIEASSRLIRELLDRHGTGRLLFRNTRAAVQ
GFPERQLHPYPLPCPAEYLELPLGEHAELYPEVAFQSQQDDGEASNRWWQFDPRVEWLID
TLKMLKKYKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQQHTIQLHVPYLETS
PQERLFKWYHQALNAFLNTCPTGNALQHRFGQRLLGQLEEGDDDTYQLLIDEARAERERL
EAELHSGRDRLLELNSGGGEQGKALVEAIEEQDDQFALPIYMEQLFDAFGIDSEDHSENA
LVLRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMG
NTAVALIKNKALKPGTVLLELLFVSEVVAPRALQLSRFLPPLALRCLLDGNGNDLASKVA
FDTLNDQLESVPRASANKFVQAQRDVLATQIAAAEAKIAPRHSERVAEAQRKLKAGLEEE
LARLVALQAVNPSVRDSEIEALRQQREDGLAALEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatctaccggggcaacgctggatcagcgacagcgaggcagaactcggc
ctcggaaccatcctgacccaggatgggcggatgctcaccgtgctctatccggcgaccggc
gaaacgcgccagtacgcgacacgcagcgccccactgacgcgggtgcgcttcgtgcccggt
gacgagatcacccatttcgaaggctggaagatgaccgtgcgcgaggtcgacgacgtcgac
ggcctgctggtctaccacggcctgaccgcgcagaacgaagcccgcaccctgccggaaacc
cagctgtcgaacttcattcagttccgcctggccagcgaccgcctcttcgccgggcagatc
gacccgctcgcctggttcagcctgcgctaccacaccctgcagcaccagagcgcccagctg
cagtcctcgctatggggcctcggtggcgtgcgtgcgcagcccatcgcgcaccaactgcac
atcgccaaggaagtcgctgaccgcatcgccccccgcgtactgctggccgacgaagtgggc
ctgggcaagaccatcgaagccggcctgatcatccatcgccaactgctctcaggccgcgcc
agccgggtgctgatcctggttccggaaaacctccagcaccagtggctggtggagatgcgc
cgccgcttcaacctggaagtcgcactgttcgatgccgagcgcttcatcgagagcgatgcc
agcaacccgttcgaagacacccagctggcactggtatcgctggaatggctgaaggaagac
gagcgtgcccaggacgctgccttcgccgcaggctgggacgtgctggtagtggacgaagcg
caccacctggtctggcacccggaaggtgccagcgccgaatacaaactggtcgaacagctg
gccgaagtgatccccggcgtgctgctgctgactgcaactccggaacagctcggcctggac
agccacttcgcccgtctgcgtctgctcgatccgaatcgtttccatgacctcgatgccttc
cgcgccgaaagctccagctaccagccggtggccgaagccgtgcaggagctgctcgacgag
ggccggctctcgcagcaggcacaccagactatccacgatttcctcggcgccgagggcgaa
gccctgctggccgccgccaccgatggcgacatcgaggccagcagccggctgatccgcgag
ctgctcgaccgtcacggcaccggccgtctgctgttccgcaacacccgtgccgccgtgcag
ggtttcccggagcgccagctgcatccctatccgctgccctgcccggccgaatacctcgaa
ctgccgctgggcgagcatgccgagctgtatccggaggtggccttccagagccagcaggac
gacggcgaggcgagcaaccgctggtggcagttcgatccgcgcgtggaatggctgatcgac
accctgaagatgctgaagaagtacaaggtgctggtcatctgcgcccatgccgagaccgcc
ctggatctggaagacgcgctgcgcgtgcgctccggcattccggccacggtgttccacgaa
ggcatgagcatcctcgagcgcgatcgcgccgcggcctacttcgccgacgaggagttcggc
gcgcaggtgctgatctgctcggaaatcggcagtgagggccgcaacttccagttcagccac
catctggtgctgttcgatctgccggcgcacccggaccttctcgagcagcgcatcggccgt
ctcgaccgcatcggccagcagcacaccatccagctgcacgtgccgtatctggaaaccagt
ccgcaggaacgcctgttcaagtggtatcaccaggcactgaacgccttcctcaacacctgc
ccgaccggcaacgccctgcagcaccgcttcggacagcgtctgctggggcagctggaagaa
ggtgacgacgacacctatcagctgctgatcgacgaggcccgcgccgagcgcgagcgtctg
gaagccgaactgcacagcggtcgcgaccgtctgctggaactcaattccggcggcggcgaa
caaggcaaggcgctggtcgaagccatcgaggagcaggacgaccagttcgccctgccgatc
tatatggagcaactgttcgacgcgttcggtatcgacagcgaagaccactcggaaaacgcc
ctggtactgcgccccagcgagaaaatgctggatgccagcttcccgctgggcgatgacgaa
gccgtgaccatcacctacgaccgtgaacaggccctggcccgcgaagacatgcagttcctc
acctgggaacaccccatggtgcagggcggcatggacctggtgctgtccggctccatgggc
aacaccgcggtcgcgctgatcaagaacaaggcgctcaagccgggcaccgtactgctcgag
ttgctgttcgtcagtgaggtggtggcgccgcgtgcactgcagctgagccgcttcctgccg
ccgctggcgctgcgctgcctgctcgacggcaacggcaacgacctggcctcgaaggtggcc
ttcgatacgctcaacgatcagctggaaagcgtgccgcgggccagcgccaacaagttcgtt
caggcccagcgcgacgtgctggccacccagatcgccgccgccgaagccaagatcgcgccc
cgccacagcgagcgcgttgccgaggcacaacgcaagctcaaggccggcctggaggaggag
ctggcgcgactggtagccctgcaggcagtcaacccgagcgtgcgcgacagcgagatcgaa
gccctgcgtcagcagcgcgaagacggcctggcagcactggaaaaggcggccttgcgattg
gaggcaatacgggtgctggtcgccggctga
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