Stutzerimonas chloritidismutans: LLJ08_06300
Help
Entry
LLJ08_06300 CDS
T07923
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pchl
Stutzerimonas chloritidismutans
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pchl03000
]
LLJ08_06300
Transcription factors [BR:
pchl03000
]
Prokaryotic type
Helix-turn-helix
Other families
LLJ08_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
AAA_5
HTH_23
HTH_30
HTH_20
AAA_2
AAA
HTH_22
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_28
Mg_chelatase
HTH_IclR
HTH_7
HTH_29
TetR_N
HTH_ParB
HTH_50
IstB_IS21
HTH_11
AAA_16
HTH_1
IclR_C
HTH_24
TrmB
HTH_26
HTH_17
DUF815
DUF2089
Motif
Other DBs
NCBI-ProteinID:
UEG62749
LinkDB
All DBs
Position
1367567..1369498
Genome browser
AA seq
643 aa
AA seq
DB search
MNLLSGPVSHIDAVLSLANAPHLPGDRDPIIARSWHRCVHDYGLDPARPAEARFVPRQVL
REHQDQADELINVARAGVEQLYRQIAELGYVILLTDNRGIAVQFLGDPADEKAHRKTGLF
LGSDWGEDHAGTCAVGTCIKEQQALTCHQQDHFSVWHTNLTCTAVPMFNPHGQLLAVLDI
SALHSPPTKDSQTFALQLVKQYARMIEDAYFMRVYRERPILCFDGSREFVLINRRYLLAL
GDDGELLAGNTAARGLLSEHGLMMPGPFGSLAQARIDQLFDCELSDVLSIPYASHDQVRA
FRTHRHQLFFAALMEPRRRAPEPAERSAPGGHAALDALADDDPVMRKMLARAKRLCSEPL
NVLLNGETGTGKERLAKALHESGCRRSKPFVAINCGAMPESLIESELFGYAPGTFTGARS
KGMRGLIQQADGGTLFLDEIGDMPLHLQTRLLRVLAEQEVMPLGAEKPVKVDIRVVAASH
RDLRQMVESGAFREDLFYRLNGASLKLPPLRERADKGFLIERVFAELAEGRPGNPHLRGD
AMSALLAYPWPGNIRELRNVLQYALATCEGDEITVQDLPDECLPPILARCRQSAAAAEPE
SATALREQLRRHRWNVSAVARELGVSRPTVYRRMRVLGIEAPV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgctatccggtccggtcagccatatcgacgcggtgctatcgctggccaatgcg
ccgcacctgcccggtgatcgtgatccgatcatcgcgcgctcctggcaccgctgtgtgcac
gactacggcctggatccggcgcgacctgccgaagcccgcttcgtcccgcggcaggtgctg
cgcgaacatcaggatcaggccgacgagctgatcaatgtcgcccgcgccggcgtcgagcag
ctctaccggcagatagctgagctgggttacgtgatcctgctgaccgacaaccgcggtatc
gcagtgcagtttctcggcgacccggcagacgaaaaggcgcatcgcaagaccggcctgttc
ctcggttcggactggggcgaagaccatgccggcacctgcgcagtcggcacctgcatcaag
gagcagcaggcgctcacctgtcaccagcaggatcatttcagcgtctggcataccaacctc
acctgcaccgcggtgcccatgttcaacccgcacggccagctgctggcagtgctggatatc
tccgcgctgcattcaccaccgaccaaggattcccagaccttcgccctgcagctggtcaag
cagtacgcgcggatgattgaggatgcctacttcatgcgcgtctatcgcgagcggccgatc
ctctgtttcgacggttcccgcgagttcgtcctgatcaaccgtcgctacctgctggcgctg
ggtgacgatggcgagttgctcgccggcaacaccgccgcccgcggtctgctgtccgagcac
gggttgatgatgccggggccctttggctccctggcgcaggcgcggatcgaccaactgttc
gattgcgaactgagcgatgtgctgagcattccctacgccagccatgaccaggttcgcgcc
tttcgcacccatcgccaccagttgttcttcgccgccttgatggagccgcgtcgccgtgca
ccggagccggccgaacgcagcgcgcccggtgggcatgccgcgctcgatgccctggccgac
gatgacccggtgatgcgcaagatgctggcccgcgccaagcgtctatgcagcgagccgctg
aacgtactgctcaatggcgagaccggcaccggcaaggaacgcttggccaaagcgctgcac
gaaagcggttgccggcgcagcaaacctttcgtggcgatcaactgcggcgccatgcccgag
tcgctgatcgaaagcgagctgtttggctacgcccctggcacctttaccggcgcccgtagc
aagggcatgcgcgggctgatccagcaggccgacggcggcacgctgttcctcgatgaaatc
ggcgacatgccgctgcacttgcagacccggctgttacgggtgctggccgagcaggaagtg
atgccgctgggcgccgagaaaccggtgaaggtggatatccgcgtggtggccgccagccac
cgcgacctgcggcagatggtcgaaagcggggcgtttcgcgaggacctgttctaccgcctg
aacggggcctcgctgaagctgccaccgctgcgcgagcgcgccgacaagggctttctcatc
gagcgggtgttcgccgaactcgccgagggccggccgggcaatccgcacctgcgtggcgat
gccatgagtgcgctgctggcctatccctggccgggcaacatccgcgagctgcgcaacgta
ctgcagtacgcgctggcgacctgtgagggtgacgagatcaccgtgcaggatctgccggac
gaatgcctgccaccgattctggcgcgctgtcgtcagtcggcagctgcggccgaacccgag
tcggcgacggctctgcgcgagcagctgcggcggcatcgctggaacgtcagcgccgtcgcg
cgggagcttggcgtgtcgcgcccgacggtgtaccggcgcatgcgcgtgctggggatcgaa
gcgccggtgtga
DBGET
integrated database retrieval system
