Stutzerimonas chloritidismutans: LLJ08_08315
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Entry
LLJ08_08315 CDS
T07923
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLJ08_08315 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchl03019
]
LLJ08_08315 (recQ)
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_08315 (recQ)
Enzymes [BR:
pchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LLJ08_08315 (recQ)
Messenger RNA biogenesis [BR:
pchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLJ08_08315 (recQ)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LLJ08_08315 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
HTH_23
Sigma70_r4_2
ResIII
HTH_20
HTH_7
GerE
HTH_29
PAX
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
UEG63123
LinkDB
All DBs
Position
1765879..1768002
Genome browser
AA seq
707 aa
AA seq
DB search
MLDQAQRILKDVFGYDAFRGNQGAIIERVGSGGDALVLMPTGGGKSLCYQVPALLREGLA
VVVSPLIALMDDQVATLDELGVSAVALNSTLSADEQREIAERIRRNEIKMLYLAPERLVQ
PRMLAFLQRLEIALFAIDEAHCVSQWGHDFRPEYMQLGQLAELFPGVPRIALTATADKRT
REEIVQRLHLENAERFLSSFDRPNIFYRIVPKEQPRKQLLGFLAERRGDAGIVYCMSRKK
VDDLAAFLSEQGFPALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEELPNPCGHCDNCVDGVQTWNATEPARQALSAIYRSG
QRYGVGHLVDILLGRDNDKVRGLGHQHLSVFGMGKALAEAEWRSLFRQLVARGLADVDLD
GFGGLRLSDSCRPLLRGEVNLELRRDLTSKAPKPAASAASQLVRSEERETWEALRTLRRK
LAEEHGVPPYVIFPDATLLEMLRSQPASLSDMATISGVGARKLERYGQAFLEVLQGSVEV
AKSPADIRHELITLARAGMTPAQIARQLDCSEKNVYAMLAEAIGLQQLSLEQALDLPEDL
LGEIQEAFLDGEGELPPVSAVAEQFAGRVPEQVLYCVRAALQVEFEL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccaggcacagcgcatccttaaagacgtattcggctacgacgcgtttcgtggc
aaccagggcgcgatcatcgagcgtgtcggcagtggcggcgatgcgctggtactgatgccg
accggcggcggcaagtccctgtgctaccaggttccggcgctcttgcgcgaaggactggcg
gtggtggtttcgccgctgatcgcgctgatggacgaccaggtcgcgacactcgacgagctg
ggcgtctcggccgttgcgctcaactcgacgctgagcgccgatgagcagcgcgagatcgct
gagcgcatccggcgcaacgagatcaagatgctctatctcgcgcctgagcgactggttcag
ccccgcatgctggcgttcctgcagcggctggagatcgccctgtttgccatcgacgaggcc
cattgcgtctcccagtgggggcacgacttccgtcccgagtacatgcagctgggccagctg
gccgaactgtttcctggcgtgccgcgtattgcgctgaccgcgacggcggacaagcggacg
cgggaagaaatcgtccagcgcctgcatctggagaacgccgaacggtttctctccagcttc
gaccgaccgaacatcttctatcgcatcgtgcccaaggagcagccgcgcaagcagttgctg
ggttttctagccgaacgccgcggcgatgccggcattgtctattgcatgtcgcgcaagaag
gtcgatgacctggctgcgttcctcagcgagcagggctttccggcactgccttaccacgcg
ggcctgcccaacgagctgcgcgcctatcaccagaagcgtttcctcaacgaggaaggcctg
atcatggtcgcgaccatcgccttcggcatggggatcgacaagcccaacgtgcgcttcgtc
gcccaccttgatctgcccaagtcgctggaagcctactatcaggaaaccggacgggcaggg
cgcgacgggctgcctgccgacgcctggatggcctatggcctgcaggatgtgatcttcctc
aagcagatgctcaacaactcagagggtgatgagcggcacaagcgggtcgagcagcacaag
ctcgatgccatgctggcgctttgcgaggaaacccgctgccggcgccaggcgctgctcgcg
tatttcgatgaagagctgcccaacccctgcggtcactgcgacaactgcgtcgatggcgtg
cagacctggaatgccaccgagcccgcccgtcaggcgctatcggcgatctaccgcagcggc
cagcgttacggcgtcggccatctggtggacatcctcctcgggcgtgacaatgacaaggtc
cgcggcctgggccatcagcatctgtccgtgttcggtatgggcaaggcgctggctgaggcc
gagtggcgttcgctgtttcgccagctggtggcgcgcgggctggcggacgtcgacctggat
ggtttcggtgggctgcgtctgagtgacagctgccggccgttactgcgtggagaggtgaac
ctcgaacttcgccgtgatctgaccagcaaggcaccgaagccagcagccagtgccgccagc
cagctggtgcgcagcgaggaacgggaaacctgggaagcgctgcgcaccttgcgccgcaaa
ctggccgaagaacacggtgtgccgccgtatgtgattttcccggatgccacgctgctggag
atgctacgcagccagccggcctcgctgtcggacatggccaccatcagcggtgtcggcgcg
cgcaagctggagcgctacggtcaggccttcctggaggttctgcaaggcagcgtcgaagtg
gccaagtcacctgccgatatacgacacgaattgatcacgctggcgcgcgccggcatgacc
cctgcacagatcgcgcgtcagctcgactgcagtgagaagaacgtctacgcgatgctcgcc
gaagccatcggtctgcaacagctgagcctggaacaggcgctggatctgcccgaggatctg
ctcggggaaatccaggaggcctttctcgacggcgagggcgagctgccaccggtgagcgcc
gtggccgagcagttcgctgggcgggtacccgaacaggtgctttattgcgtgcgtgccgca
ctgcaggtcgagttcgaattgtaa
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