Stutzerimonas chloritidismutans: LLJ08_12215
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Entry
LLJ08_12215 CDS
T07923
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03030
DNA replication
pchl03430
Mismatch repair
pchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LLJ08_12215 (dnaX)
03430 Mismatch repair
LLJ08_12215 (dnaX)
03440 Homologous recombination
LLJ08_12215 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchl03032
]
LLJ08_12215 (dnaX)
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_12215 (dnaX)
Enzymes [BR:
pchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LLJ08_12215 (dnaX)
DNA replication proteins [BR:
pchl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LLJ08_12215 (dnaX)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LLJ08_12215 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
AAA_14
AAA_16
AAA_18
AAA_2
PIF1
AAA_19
AAA_30
DUF3646
TsaE
nSTAND3
AAA_7
Rad17
RsgA_GTPase
SKI
HasA
Herpes_Helicase
zf-CXXC
AAA_28
Motif
Other DBs
NCBI-ProteinID:
UEG59916
LinkDB
All DBs
Position
complement(2653859..2655871)
Genome browser
AA seq
670 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGVSSTPCGVCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYAPSRGRY
KVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQKLPVTILSRCLQFSLKNMPP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGPDWAGVLAEILNVLHRVAIAQALPE
AVDNGQGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRSGFEMVLLRMLAFRP
AGSDGAPRTPLKTLGISPATADSKPAAVADSAPAGVSSTPSAAIAVAAAPEPAPVAPAVT
MPVNVPAPTPSAVTPVATHVVEAPQAAPVIDVPWNEPPDVPPVAVEADAVLPQPVPVDGA
ADHVASVVQVEEPDDDEPPLTDEDYFEVENQAEAYLDELEHSRDEPEPVEPLPAVEPATG
LAAEWLELYLKLGLSGLTGSIAANCTLIAVEGDRWLMHLDPAQSALFNPTQQRRLNDALN
QYHGRTLQLEIVLQKPEQETPAQAALRRRAERQRAAEQSIHADPLVRQLMQQFAAVIREG
TIEPVEHSET
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgaaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacgcatgtgctcaaggccctgatcaacgcgctggacaaccagcgcctgcaccacgct
tacctgttcaccggcacgcgaggcgtgggcaagacgaccattgcgcggatcattgccaag
tgcctgaactgtgaaaccggggtcagctcgacgccctgcggtgtgtgttcggtatgccgg
gaaatcgacgaggggcgcttcgtcgatctgatcgaggtggacgccgcgagccgtaccaag
gtcgaagacacccgcgagctgctggacaacgtgcagtacgcgccgagccgcgggcgctac
aaggtttacctgatcgacgaagtgcacatgctctcgtcgcactcattcaatgcgctgctc
aagaccctcgaggagccgccgccccacgtcaagttcctgctggcgaccaccgatccgcaa
aagctgccggtcaccatcctctcgcgctgcctgcagttctccctgaagaacatgccgccc
gagcgggtggtcgagcacctcactcatgtgctgggcgtcgagaacgttcccttcgaagac
gatgcgttgtggctgctggggcgtgccgccgatggctcgatgcgcgatgcgatgagcctg
accgatcaggcgatcgccttcggtgaaggcaaggtgctggccgccgatgtgcgcgccatg
ctcggcaccctcgatcatggtcaggtctatggtgtgctgcaggcattgcttgaaggcgat
gccagagcgttgctcgaggccgttcgccacttggcggagcaggggccggactgggctggc
gtgctggccgaaatcctcaatgtgctgcaccgcgtcgccatcgcccaggcgctgccggag
gcagtggacaatggccagggcgatcgtgatcgcgtgctggcgttggctcaggcgctaccg
gccgaggatgtgcagttctactatcagatgggattgatcggccggcgcgatctgccgctg
gcgcctgatcctcgcagcggtttcgaaatggtgctgctgcgcatgctggcatttcgtcct
gcaggcagtgatggcgcaccgcgaacaccgctaaagacactgggaatcagcccggccaca
gctgattccaagcccgcagcggtggccgattccgctcccgctggcgtgtcgtccactcca
tccgctgcgattgccgtagcagctgcgccagagcccgctcccgttgcgccggccgttacc
atgccagtgaacgtgccggctcccacgccctcggcagtgacgccggtcgccactcatgtg
gtggaagcgccgcaggccgcgcctgtcatcgatgtgccgtggaatgagccgcctgacgta
ccgcccgtcgcggtcgaggctgatgccgttttaccccaacctgtgccggtggacggcgct
gccgatcacgtggcgtccgtggtacaggtcgaagagccggatgatgacgaaccgccgctg
acggacgaagactacttcgaggtcgagaaccaggccgaggcctatctggacgaactggaa
cactcaagggatgagccggagcccgtcgagcctctgcctgcggtagagcctgcgaccggg
ctggctgccgaatggctggaactgtatctcaagctcggcttgtccggtcttaccggcagc
attgccgccaactgtacgttgatcgccgtggaaggcgaccgttggctgatgcatctcgat
cctgcgcagagcgcactattcaaccccacgcaacagcggcgactaaacgacgccctgaat
caataccacgggcgtacgctacagctcgagatcgtgctgcagaagccggagcaggaaacg
cctgcgcaggccgccctgcgtcgccgtgccgaacgacagcgtgccgcggaacagtcgatt
cacgcagatcctctggtccggcagctcatgcagcagttcgccgctgtgatccgcgaaggc
accatcgaacccgtagaacactccgaaacctga
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