Stutzerimonas chloritidismutans: LLJ08_13725
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Entry
LLJ08_13725 CDS
T07923
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pchl
Stutzerimonas chloritidismutans
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pchl03016
]
LLJ08_13725 (truD)
Enzymes [BR:
pchl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LLJ08_13725 (truD)
Transfer RNA biogenesis [BR:
pchl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LLJ08_13725 (truD)
Prokaryotic type
LLJ08_13725 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF465
Motif
Other DBs
NCBI-ProteinID:
UEG60195
LinkDB
All DBs
Position
complement(2970408..2971448)
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AA seq
346 aa
AA seq
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MTEDQLLGPRAHGEPCGSAVLKAVAEDFQVDEVLDIPLSGEGEHLWLWVEKRNLNTEEAA
KRIARAAGVPLKMISYAGLKDRQALTRQWFSLHLPGKSDPDLAAAESGGLAILKRTRHQR
KLQRGAHSANGFRLRLTELRGEHAALDERLERIKASGVPNYFGLQRFGYEGSNLHGARHF
AAKGELPEQRNMRSRLLSAGRSYLFNRVLAERVGDGSWDQARVGDLLAFTDSRSFFPAGP
DECDDPRLTILDLHPTGPLWGMEGSPAGDEIQALENAVAETEPTVVNWLAQAGMKHERRI
LRLPIGGLSWHYPEPDILQLEFVLPTGCFATAVVRELVSLAGQTDI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagatcagctgctcgggccgcgcgcccatggtgagccctgtggcagtgcggtg
ctgaaagcggttgccgaggattttcaggtcgatgaagtgctcgatatcccgctgtccggc
gaaggcgagcacctctggttgtgggtggaaaagcgcaatctgaacaccgaggaagccgcc
aaacgcatcgcccgcgccgctggcgtgccgctgaagatgatcagctacgccgggctcaag
gaccgccaggcattgactcgccagtggttcagcctgcatctgccgggcaagagcgatccg
gatcttgccgctgccgagagcggcggcctggcgatcctcaagcgcacccggcatcagcgt
aagctgcagcgcggcgcgcactcggccaatggcttccgcctacgcttgacggagctgcgc
ggtgaacatgccgcgctggatgagcggctggagcggatcaaggcctccggcgtgccgaat
tacttcggcctgcagcgtttcggctatgagggcagcaacctgcacggtgcacggcacttc
gcggcgaaaggtgagcttccggagcagcgcaacatgcgttcgcggctgctttcggctggt
cgtagttacctgtttaaccgtgtgctcgccgaacgggttggggatggcagctgggatcag
gcacgagtaggcgatctcctggcattcaccgacagtcgcagctttttcccggccgggccg
gacgagtgcgacgacccgcgcctgacgattctggatctgcatccgaccggccctttatgg
ggcatggaaggctctccagcaggtgacgaaattcaggcactggaaaacgccgtcgccgaa
actgaacccacagtcgtcaattggttggcgcaggcaggaatgaagcacgaacggcgcatt
cttcgcctccccatcggcggtttgtcgtggcattatcccgagcctgacattctgcaactg
gaattcgtcctgccgaccggatgcttcgccaccgccgtggtgcgtgagctggtcagcctg
gcagggcagacggacatctga
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