Stutzerimonas chloritidismutans: LLJ08_13805
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Entry
LLJ08_13805 CDS
T07923
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03030
DNA replication
pchl03430
Mismatch repair
pchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LLJ08_13805 (dnaE)
03430 Mismatch repair
LLJ08_13805 (dnaE)
03440 Homologous recombination
LLJ08_13805 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchl03032
]
LLJ08_13805 (dnaE)
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_13805 (dnaE)
Enzymes [BR:
pchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LLJ08_13805 (dnaE)
DNA replication proteins [BR:
pchl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LLJ08_13805 (dnaE)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LLJ08_13805 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
UEG60209
LinkDB
All DBs
Position
complement(2986129..2989650)
Genome browser
AA seq
1173 aa
AA seq
DB search
MPVSFVHLRLHTEYSLVDGLVRVKPLIKAVAAGGMPAVAVTDMSNMCSLVKFYKAAQGAG
IKPICGADIWMAGCDEDGPLSRLTLLAMNPKGYRNLTELISRGWTEGQRNDLVIIERDWV
KQAAEGVIALSGAREGEVGQALLNGDEPLAESRLAEWRDVFADRFYLEVQRTSRVNDEEY
LHAAVALAERSGTPLVATNDVRFLKQEDFEAHETRVCIGEGRTLDDPRRPRTYSDQQYLK
TPAEMAELFSDLPEALENTVEIAKRCNIEVQLGTYFLPNFPVPEGMTIDDYLRQVSFEGL
EERLEVLLPKDTPDYEAKKQVYIDRLEFELGTIIQMGFPGYFLIVMDFIKWAKNNGVPVG
PGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERISMPDFDVDFCMDGRDRVIDYVA
EAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEMEE
PLRDFLAVDEDAREIWEMALKLEGITRGTGKHAGGVVIAPTKLTDFAPIACDEEGGGLVT
QFDKDDVEQAGLVKFDFLGLRTLTIIKWALETINREQAKKGLEPINIDFIPLDDKPTYQL
LQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGRA
EVSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPEE
MAKQRGGFIEGCSNNGIDKELSGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKAHYP
SPFMAAVLSADMHNTDKVVILIEECRSMKLRIDPPDVNISEFKFTVNDDGRIVYGLGAVK
GVGEGPVEAIAECRAEGGSFKDLFDFCARIDLKRINKRTLEALIRSGALDRLGPYFFEEV
KAYQANIDRNRAVLLAAMEEAVQAAEQTARSAESGHMDLFGGLFAEPEADVYANHRKARE
LSLKERLKGEKDTLGLYLTGHPIDEYEGEVRRFARQRIVDLRPARGEQTIAGLIVNLRVM
KNKKGDKMGFITLDDRSGRIEASLFAEAFNTAQALLQTDALVVVEGEVSNDDFSGGLRLR
AKRVMSLEEARTGLAESLRVKVAGEALKGERMRWLAEVCGRHRGACPITLEYTGRDARAL
LQFGEAWRIDPADNLIQALRDQFGRDNVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttccttcgtccatctacgtctgcataccgagtactcgctggtcgatgggctg
gttcgggtcaagccgctgatcaaggcggtcgcggcaggtggcatgccggcagtggcggtg
accgacatgagcaatatgtgctcgctggtcaagttctataaagccgcgcagggcgccggc
ataaagccgatttgcggtgccgatatctggatggctggttgtgacgaggacggtcctctc
agccgcttgaccttgctggcgatgaatcccaaggggtatcgcaatctcaccgagttgatc
tctcgcggctggaccgaaggccagcgcaacgatctggtgatcatcgagcgcgactgggtc
aagcaggccgccgaaggtgtgatcgccttgtctggcgccagggagggagaggtcggccag
gcgctgctcaatggcgacgaaccactggccgaatcgcgtctggctgaatggcgcgatgtg
tttgccgatcgcttctacctggaagttcagcgcaccagccgggtcaatgacgaagagtat
ctgcacgctgcagtcgcgctcgccgagcgcagcggtacgccgctggtcgcgacgaacgac
gtgcgtttcctcaagcaggaagacttcgaggcccacgagacccgcgtatgcatcggtgaa
ggccgaacactggacgatccgcggcggccgcgtacctactctgatcagcagtatctgaag
actccggcagagatggccgagctgttcagcgacctccccgaggcgctggaaaacaccgtc
gagatcgccaagcgctgcaacatcgaagtgcagttgggtacctacttcctgccgaacttc
cccgtgcccgagggcatgaccatcgacgactacctgcgtcaggtgtcgttcgaagggctg
gaagaacgccttgaggtgctgctacccaaggacactcctgactacgaggcgaagaagcag
gtctacatcgatcgcctagagttcgagctgggcaccatcatccagatgggcttccccggt
tacttcctgatcgttatggacttcatcaagtgggcgaagaacaacggcgtaccggtcggc
ccaggccgtggctcgggtgccggctcactggtcgcctacgtgctgaagatcaccgacctc
gatccgctggcctatgacctcctgttcgagcgcttcctcaaccccgaacgtatttccatg
cccgacttcgacgtcgacttttgcatggatggtcgcgaccgggtcatcgattacgtggcc
gaggcatatggccgtaatgcggtcagccagatcatcaccttcggcaccatggcggccaag
gccgtggtgcgcgacgtggcgcgggtgcagggcaagtcctacggcctggctgatcggttg
tcgaagatgattcccttcgaagtcggcatgacgctggaaaaggcctacgaaatggaggag
ccgctgcgcgacttcctcgccgttgacgaggacgcccgggaaatctgggagatggcgctc
aagctcgaaggtattactcgcggtaccggtaagcacgccggtggtgtggtgatcgcgcca
accaagctcaccgacttcgcgccgatcgcttgcgacgaggagggtggcggcctggtgacc
cagttcgacaaggacgacgtcgagcaggccggtctggtgaagttcgacttcctcggcctg
cggacgctgaccatcatcaagtgggcgctggaaaccatcaaccgcgaacaggccaagaag
ggcctggagccgatcaacatcgacttcatcccgctggatgacaagccaacctaccagttg
ctgcagaaggccgagaccaccgcggttttccagctcgaatcccgcggtatgaaggagttg
atcaaaaagctcaagcccgactgcctggaagacctgatcgcactggtggcgctgttccgt
cccggtccgttgcaatcgggcatggtggacgacttcatcaaccgcaagcacgggcgtgcc
gaagtctcctatccacacccggactaccagtacgccgggctggagccagtgctcaagccc
acctacggcatcatcctgtaccaggaacaggtgatgcagatcgcacaggtcatggccggc
tatacgctgggtggtgcggacatgctgcgccgcgccatgggcaagaagaagcccgaggag
atggccaagcagcgcggtggtttcatcgaaggctgttccaacaatggcatcgataaagaa
ctctcaggcaacatcttcgacctggtagagaagttcgccggttacggtttcaacaagtcg
cactcggcggcctacggtctggtttcctaccagacggcctggctcaaggcgcactacccg
tcgccgttcatggctgccgtgctctcggcggatatgcacaataccgacaaggtggtgatc
cttatcgaggaatgccgcagcatgaagctgcgcatcgacccgcccgatgtgaacatttcc
gagttcaagttcaccgtcaacgatgacggccgtatcgtctatggcctaggtgcagtcaag
ggcgtgggcgaggggccggtcgaggccatcgctgaatgtcgtgccgaaggtgggtcattc
aaggacctgttcgacttctgcgcgcggatcgacctgaaacggatcaacaagcgtaccctt
gaggcgctgattcgctccggtgcgctggatcgtctaggtccgtatttcttcgaagaggtc
aaggcctatcaggccaacatcgaccgcaatcgggcggttttgctggcggcgatggaagaa
gcggtgcaggccgcggagcagacggcgcgcagcgctgagagcggccacatggacctgttt
ggcggcttgttcgccgagcccgaagctgacgtctacgccaaccaccgcaaggcgcgcgag
ctgtctctgaaggagcgtctgaaaggtgaaaaggacaccctaggcctctatctcactggt
cacccgatcgatgaatacgagggcgaggtgcgccgcttcgcacgccagcgcatcgtcgat
ctacgtccggcgcgtggcgagcagaccattgccggcctgatcgtcaatctgcgggtaatg
aagaacaagaagggcgacaagatgggtttcatcaccctggatgaccgctcggggcgcatc
gaggcgtcactgttcgccgaggctttcaatactgctcaggcgttgttgcaaaccgatgcg
ctggtcgtggtggagggcgaggtaagcaacgatgacttttccggtggcctgcggctgcgc
gccaagcgggtgatgagcctggaagaggcgcgcaccgggctcgccgaaagtctacgggtc
aaggtcgctggtgaagcgctcaagggtgagcgcatgcgttggctggctgaggtctgtggc
cgtcatcgcggggcctgcccgattacgctggagtacaccggtcgtgacgcgcgtgccctg
ctgcagttcggtgaagcctggcggatcgacccggccgacaacttgattcaggcattgcgt
gaccagttcggacgcgacaacgtcttcctgcaataccgatag
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