Stutzerimonas chloritidismutans: LLJ08_15310
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Entry
LLJ08_15310 CDS
T07923
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLJ08_15310 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchl03019
]
LLJ08_15310 (rhlB)
Enzymes [BR:
pchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLJ08_15310 (rhlB)
Messenger RNA biogenesis [BR:
pchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLJ08_15310 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UEG60490
LinkDB
All DBs
Position
3292793..3294220
Genome browser
AA seq
475 aa
AA seq
DB search
MLKALKKIFGKAPDVRASAADDVLAADHEGQHSAPQQATTPDSQPKPQTAERAAEKPRRQ
RSSKPPKPAAPAWKLEDFEVEAAEGKTRFHDFKLAPELMHAIHDLGFPYCTPIQAQVLGY
TLAGRDAIGRAQTGTGKTAAFLISTITQLLDTPPPRDRYMGEPRALIIAPTRELVVQIAN
DALDLTKYTNLNVMSFVGGMDFDKQLKLLESKFCDILVATPGRLLDFNQRGEVHLDMVEV
MVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTDDVMNLAQQWTTNPAIVEI
EPENVASDTVEQHVFAVAGSDKYKLLYNLITQNDWTRVMVFANRKDEVRRIEERLTRDGI
SAAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHVDGISHVINFTLPEDPDDYV
HRIGRTGRAGTSGTSISFAGEDDSFALPPIEALIGRKIQCEMPPAELLAPVPHSR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactcaagaaaatctttggcaaggccccggatgtacgggccagcgcagcc
gatgacgtgctcgccgccgaccacgagggccaacacagcgcccctcagcaagcaacgacg
cctgattctcaacccaagccgcagaccgctgagcgcgccgccgaaaagccgcgccgtcaa
cgcagcagcaagccgccaaaacccgccgctccggcgtggaagctggaggacttcgaggtc
gaagcggccgaaggcaagacccgcttccacgacttcaagctcgcacccgagctgatgcac
gcaattcatgacctgggttttccctactgcacgccgatccaggcccaggtgctcggctat
accctcgccggcagagacgccattggccgcgcccagaccggcactggcaagacggctgcg
tttctcatctccaccatcacacagctgctcgacactccaccgccgcgggaccgctatatg
ggcgaaccccgcgcactgatcatcgcgccgacccgtgaactcgtggtgcagatcgccaac
gacgcgctggacctgaccaagtacaccaacctgaacgtgatgagcttcgtcggcggcatg
gacttcgacaagcagctcaagctgctggaatcgaaattctgcgacatcctggttgccacg
cccgggcgcttgctggatttcaaccagcgcggcgaggtgcatctggacatggtcgaggtg
atggtgctggatgaagccgatcgtatgctcgacatgggcttcattccgcaggtccgccag
atcatccggcagacgccgcccaagagcgagcgccaaaccctgctgttctcagccacgttc
accgatgacgtgatgaacctggcgcagcagtggacgaccaatcccgccatcgtcgagatc
gaaccggaaaacgtcgccagcgacaccgtagaacagcacgtattcgccgtggccggcagt
gacaagtacaagctgctgtacaacctgatcacccagaatgactggacgcgagtgatggtc
ttcgccaaccgcaaggatgaagtgcggcgcatcgaggaacgcctgacccgggacggcatc
agcgccgcgcagatgtccggcgacgtgccgcagcacaagcgcatccgcacgctggaaggt
ttccgcgagggcaagattcgggtactggtggcgaccgatgtcgccggtcgaggcatccat
gtcgacggcatcagccacgtgatcaactttacgctgccggaagacccggatgactacgtg
caccgcatcggccgcaccggccgtgccggcaccagcggcacgtcgatcagcttcgcgggc
gaggacgactccttcgccctgccgccgatcgaagcgctgattggccgcaagattcagtgc
gaaatgccgccggcggagctgctcgccccggtccctcattcgcgctga
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