Stutzerimonas chloritidismutans: LLJ08_16805
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Entry
LLJ08_16805 CDS
T07923
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLJ08_16805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchl03019
]
LLJ08_16805
Enzymes [BR:
pchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LLJ08_16805
Messenger RNA biogenesis [BR:
pchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLJ08_16805
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
UEG60776
LinkDB
All DBs
Position
complement(3594080..3595405)
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AA seq
441 aa
AA seq
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MTFASLGLIDPLLRTLETLDYRKPTPVQIEAIPAVLKGRDLMAAAQTGTGKTAGFALPLL
QRLTMEGAKVASNSVRALVLVPTRELAEQVHESFRVYGQNLPLRTYAVYGGVSINPQMMA
LRKGIDVLVATPGRLLDLYRQNAVGFNQLQALVLDEADRMLDLGFADELDQLFAALPKKR
QTLLFSATFSEPIRQMARELLRDPLSVEVSPRNAAAKTVKQWLVPVDKKRKSELFLHLLA
DKRWGQVLVFVKTRKGVDQLVDELQAAGISSDAIHGDKPQASRLRALERFKAGEVQVLVA
TDVAARGLDIHDLPQVVNFDLPIVAEDYVHRIGRTGRAGATGEAVSLVSADEVDQLAAIE
TLINQVLPRHDELGFVPDHRVPTTTLGGQIIKKPKKPKKPKDGGGKGKIHLGNWFDESEK
PNARPIRKVPSLGGGKPAKKR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgcctccctgggcctgatcgatccgctgctgcggaccctggaaaccctcgac
taccgcaagccgacgccggtgcagatcgaagccattcccgccgtgctcaagggccgcgac
ctgatggcggcggcgcagaccggtaccggcaagaccgccggtttcgccctgccattgctg
cagcgcctgaccatggaaggcgccaaggtggcgagcaattcggtgcgcgcgctggtgctg
gtgccgacccgcgagctggccgagcaggtccatgagagttttcgtgtctacgggcagaac
ctgccgctgcgcacctacgcggtgtacggcggtgtcagcatcaacccgcagatgatggcg
ctgcgcaagggcatcgacgtgctggtggcgacgcccggtcgcctgctcgacctctaccgg
cagaacgccgtgggcttcaatcagctgcaggcgctggtgctcgacgaggccgatcgcatg
ctcgacctcggtttcgccgacgagctggaccaactgttcgccgcactgccgaagaagcgc
cagaccctgctgttctccgcgaccttctccgagccgatccggcaaatggcccgcgagctg
ctgcgcgacccgctatcggtcgaggtcagcccacgcaacgccgcggcgaagacggtcaag
cagtggctggtgccagtggacaagaagcgcaagtccgagctgttcctgcatctgctggcg
gacaagcgctggggccaggtgctggtgttcgtcaagacgcgcaagggtgtcgatcagctg
gtggacgagctgcaggctgcgggcatttccagcgatgcgatccacggcgacaaaccacag
gcctcgcggctgcgtgcgctggagcgcttcaaggcgggcgaagtgcaggtgctggtggcg
accgatgtcgccgcgcgcgggctggacatccatgatctgccgcaggtggtcaacttcgac
ctgccgatcgtcgccgaagactacgtacaccgcatcggccgcaccggtcgcgccggcgcc
acgggcgaggcggtatcgctggtcagcgccgatgaagtcgatcagcttgcggccatcgag
accctgatcaaccaggtgctgccgcgccacgacgaattgggcttcgtgccggaccatcgt
gtgccgaccaccacgctgggcgggcagatcatcaagaagccgaagaaaccgaaaaagccc
aaggacggcggcggcaagggcaagattcatctcggcaactggttcgacgagagcgaaaag
cccaacgccaggccgattcgcaaggtgccgagcctaggcggcggcaagccggcgaagaag
cgctga
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