Stutzerimonas chloritidismutans: LLJ08_16955
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Entry
LLJ08_16955 CDS
T07923
Name
(GenBank) exonuclease SbcCD subunit D C-terminal domain-containing protein
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pchl
Stutzerimonas chloritidismutans
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_16955
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LLJ08_16955
Archaeal homologous recombinant proteins
LLJ08_16955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
UEG60806
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All DBs
Position
3628225..3629460
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AA seq
411 aa
AA seq
DB search
MRLIHTSDWHLGQTLHGQDRDFEHAQFLAWLLDQLVAHRADALLIAGDVFDTVNPPLKAQ
ERLYDFIVRAHEKLPQLDIVMIAGNHDSGGRIELPAPLMKRLNAHAVGRISWVAEGQLDH
QRLLVPLHDAAGNTAAWCLTLPFLRPAEVTGMTLGDDYMAGIRQVHERLIAAAESARQPG
QALVAMSHAHMAGGAVSEESERNIVIGNAEALPASLFPESVAYVALGHLHKPQQVAGQSR
IRYSGSPLPLSFAEVNYPHQVLLVELDGEQLAQVESLPVPRAVEMIRIGRAPLAEIITAL
EALPPTGLFDDNLPWLEVRVLLDEPLPDLRQRIETAITGKACRLVRIASEYAGKRGETES
EVLLGLDQITPQELFARAWEEQYGNPADEQALDDFATLLQRVEFAHEEDGR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctccgactggcacctcggccagaccctccatggccaggaccgc
gacttcgaacacgcacaattcctcgcctggctgctcgaccagctggtcgcccaccgcgcc
gacgccctgctcatagccggggacgtgttcgacacggtcaacccgccactcaaggcccag
gaacgcctctacgatttcatcgtccgcgcccacgaaaaactcccgcagctggacatcgtg
atgatcgccggcaatcacgactccggcgggcgtatcgaactgccagcgccgctgatgaag
cgcctcaacgcacacgccgtcggtcgcatcagctgggtcgccgagggccagctggatcac
cagcggctgctggtgccgctacacgacgccgctggcaacaccgccgcctggtgtctcacc
ctgcccttcctgcgtccggccgaagtcaccggaatgacgctgggcgacgactacatggcc
ggcatccgtcaggtgcatgaacgcctcatcgccgccgccgaatccgcacgccagcccggc
caggctctggtcgccatgagccacgcgcacatggccggcggcgcggtgtcggaggagtcc
gagcgcaatatcgttatcggcaacgccgaagcgctgccggccagcctgtttcccgaatcg
gtcgcctacgtcgccctcggccacctgcacaagccgcagcaggtcgccgggcagtcgcgc
atccgctacagcggctcgccgctgccgctgtccttcgccgaggtcaactacccgcatcag
gtgctgctggtcgagctcgacggcgagcagctggcgcaggtcgaaagtctgccggtgccg
cgcgcggtggaaatgatccgcatcggccgcgcgcccctggccgaaatcattaccgcgctg
gaagcgctgccgcccaccgggctgttcgacgacaacctgccctggctggaggtacgcgtg
ctgctcgacgagccgctgccggacctgcgccagcgcatcgaaaccgcgataaccggcaag
gcctgccgactggtgcgcatcgccagtgaatacgccggcaagcgcggcgagacggaatcg
gaagtgctgctcggcctcgaccagatcaccccgcaggagctgttcgcccgcgcctgggaa
gaacagtacggcaacccggcggacgagcaggcgctggacgatttcgccactttgctgcaa
cgagtcgagttcgcacatgaggaggacggtcgatga
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