Stutzerimonas chloritidismutans: LLJ08_16960
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Entry
LLJ08_16960 CDS
T07923
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pchl
Stutzerimonas chloritidismutans
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_16960
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LLJ08_16960
Archaeal homologous recombinant proteins
LLJ08_16960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SbcC_Walker_B
AAA_23
AAA_29
AAA_21
ABC_tran
nSTAND3
AAA_15
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UEG60807
LinkDB
All DBs
Position
3629457..3633110
Genome browser
AA seq
1217 aa
AA seq
DB search
MKILAIRLKNLASLAGEQIIDFTAEPLASAGLFAITGPTGAGKSTILDALCLALFGSTPR
LDSVSPLNKVPDVETEIGGGDERNLLRRGCGSGYAEVDFVGVDGHRYRARWEVRRAKEKI
DGKLQASSQSLTDLDSGTLLASGKKREFKELLEARLGLTLAQFTRAVLLAQSEFSAFLKA
DDNERGTLLEKLTDTGLYSRLGQASFEAAKQAKESLTRLEQQAGGLQPLEPEQREVLERE
HQAQLEELKKLQQQLKELEAQRQWLSELQRLENEREAARQQLQDAEGERESLTEARRILD
LFERLAPQRHRFLRQQELEPLLGKAADSLARLQHEAQSLQQRLDTLQSECEAASNDLRAA
EQARQDAEPRLVQARREEERLQHLNADFASIREESVQADAAASTGEATLKQLAEQQQRAA
EQLATLTQQLETSAALQPLCAAWGGYRPRLQQAVQLAARLQQGQGELPALEAQAKAAETR
QSQAREALDNLQRERDSELGLAEQLAGLHRQLDEWRQAERETEALRELWAQQLTLTASQR
ELSDAHIRQQAELDSLVPQGKQLRSDRDAAEQALKVTLALLERQRLARSENVEALRAALV
PGEPCPVCGSDEHPWQQTDALVASLDQHDDSEAERARQSLQEQDQRLQELRDRHVALSTQ
LRQTQQRQGEVEVQLQALAPRLLALPAHSRLLEQPEAERSQWLAAQLTTLKDQIANTSQR
QQQLLALQQRSETLQQAWQAAREACVEATQQLARQRDALARDHQQLDEELQTFAELLPTE
QLQRWRENPAQTFMQLDTSIATRLQQLQAQTELADELRQCEQRRSDEQLQQRHRQEKQES
CSARLTEREKLLLACQQALRTSLGEQTSASAWQRQLDATIQAARQTQAEIDRQLNESKLG
LTRLHSEQQNCRQRQAELEQERDALNAELATWRTSHPQLDDATLAQLLHMDDQLIAEARQ
RLQQNAETLTRCRERLDGCLSRLNTHKLQQAETPDIERLQQRHAEQLQQCEQADQRCAET
RAQLIDDDKRRSQSQALLAQIDAARAEHQRWGRIAALIGSSDGGAFRKIAQAYNLDLLVQ
HANVQLRQLARRYRLKRGGSPLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSKLRIESLFIDEGFGSLDPESLQIAMDALDSLQAQGRKVAVISHVAEMHERIPVQIQV
RRQGNGQSDLQIVGGLS
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccatccgtctgaagaacctggcctccttggccggcgaacagatcatc
gatttcaccgccgagccgctggccagcgccggactgttcgccatcaccgggcctacaggt
gccggcaagagcaccattctcgacgccctgtgcctggcgctgttcggcagcacgccacgg
ctcgacagcgtctcaccgctgaacaaggttcccgacgtcgaaaccgagatcggcggtggc
gacgagcgcaacctgctgcgccgcggttgtggcagcggctacgcagaagtggatttcgtc
ggtgtcgacggccaccgctaccgcgcgcgctgggaggtcaggcgtgccaaagagaagatc
gacggcaaactgcaggccagcagccagagcctcaccgatctggacagcggcacgctcctg
gccagcggtaaaaagcgcgagttcaaggaactgctggaagcgcgtctggggctgaccctg
gcccagttcacccgcgccgtgctgctggcgcagagcgagttttccgccttcctcaaggcc
gacgacaacgagcgtggcaccctgctggaaaagctcaccgataccggcctctacagtcgc
ctcggccaggcctcgttcgaggccgccaagcaggcgaaggagagcctgactcgcctggaa
cagcaggccggtggcctgcaaccactggagcccgagcagcgtgaagtactggagcgcgaa
catcaggcccagctcgaagaattgaagaagctgcaacagcagctcaaggagctggaagcc
cagcggcaatggctcagcgaactgcagcgcctggaaaacgagcgcgaagccgcacgccag
cagctgcaggacgccgaaggcgagcgcgagagcctgaccgaggcccgccgtattctcgac
ctgttcgaacggctcgcaccgcagcgccaccgctttctgcgccagcaggaactcgaaccg
ctgctgggcaaggccgccgacagcctcgctcgcctgcagcacgaggcgcaaagcctgcag
caacgtctcgacaccttgcagagcgagtgcgaagcggccagcaacgacctgcgtgcggcc
gaacaggcgcgccaggacgccgagccgcggctcgtccaggcgcgccgtgaagaagaacgc
ctacagcatctgaacgccgacttcgcctcgatccgcgaagaaagcgtccaggccgatgcc
gcggcgagcaccggcgaggcaacgctcaagcagctcgccgagcagcaacagcgcgccgcc
gaacagctagcaacgctgacgcagcaactcgagacgagcgcagcgctgcaaccactttgt
gcagcctggggcggttaccgtccgcgtctgcaacaggccgtccagctggcggcacggctg
cagcaaggtcagggcgaactcccggcactggaagcgcaggccaaggctgccgaaacccgg
caaagccaggcgcgcgaggcgctggacaatctgcaacgcgagcgcgacagcgaactaggg
ctggccgaacagctggccggtctgcatcgacagctcgacgaatggcgccaggccgagcgc
gaaaccgaggccctgcgcgaactctgggcgcagcagctcacgctcaccgccagccagcgc
gaactgagcgacgcccacatccgccagcaggccgagctggacagcctggtaccgcagggc
aaacagcttcgtagtgaccgtgatgctgccgagcaggcgctcaaggtcaccctcgccctg
cttgaacgccaacgcctggcacgcagcgagaatgtcgaagcgctgcgtgcggcgctcgtc
cccggcgagccctgcccggtctgcggcagcgacgagcatccctggcagcagaccgacgcg
ctggtcgccagcctagatcagcacgacgacagcgaggccgagcgcgcgcgccagtcgctg
caggaacaggaccagcgtctgcaggaactgcgcgatcgccatgtcgcgctcagcacgcag
ttgcgccagacgcaacaacgccagggcgaagtcgaggtgcagctgcaggccctggcaccg
cgcctgctagccctgcccgcacactcgcgattgcttgagcagccggaagccgagcgttcg
caatggctggcagcgcagctgacgacactcaaagaccagatcgccaacaccagccagcgt
cagcagcaactgctcgcgctgcaacagcgcagcgaaaccctgcagcaggcctggcaggcc
gcgcgcgaggcctgcgtcgaggcgacccagcaactcgcccgccaacgcgatgcgctcgcc
cgcgatcaccagcagctcgacgaggaactgcaaaccttcgccgaactgctgcccaccgaa
caactgcagcgttggcgcgaaaatccggcgcagacctttatgcagctggacaccagcatc
gccacgcggctgcagcaactgcaggcgcagaccgagctggccgatgagctgcgccagtgc
gagcagcgccgcagcgacgagcagttgcaacaacgccatcgccaggagaaacaggaaagc
tgcagcgcacgactgaccgagcgcgagaaactgctgctggcctgccagcaggcgctgcgt
accagccttggcgaacagaccagcgccagcgcctggcaacggcagctggacgcgaccatc
caggctgcgcggcaaacccaggccgagattgatcggcagctcaacgagagcaagcttggc
ctgacgcggctgcacagcgagcagcagaactgtcgccagcgccaagccgaactggaacag
gaacgcgacgcgctgaatgcggaactggccacctggcgcaccagccacccgcagctggac
gacgccaccctcgcccagctgctgcacatggatgaccagctgattgccgaggcgcgccag
cgcctgcaacagaacgccgaaaccctgacccgctgtcgcgagcgtctggacggctgcctc
agtcgcctgaacacgcacaaactgcagcaggccgaaacgccggacatcgaacggctgcag
cagcgccatgccgagcaactgcagcaatgcgagcaggccgaccagcgctgcgcggaaacc
cgcgcccagctgatcgacgacgacaagcgccgcagccagagccaggcgttgctcgcacag
atcgacgccgcacgggccgagcatcagcgctgggggcgcatcgccgccttgatcggctcc
agcgacggcggcgccttccgcaagatcgcccaggcctacaacctcgacctgttggtgcag
catgccaatgtgcagctgcgccaactggcccggcgctatcggctcaagcgcggcggcagc
ccgctgggcctactggtcatggataccgagatgggcgacgagctgcgctcggtgcattcg
ctgtccggcggcgagaccttcctcgtttcgctggccctggcgctgggcctggcctcgatg
gcctcgagcaagctcaggatcgagtcgctgtttatcgacgaaggcttcggcagcctcgac
cccgagtcgctgcagatcgccatggacgcgctggattcgctgcaggcccagggccgcaag
gtggcggtgatctcccatgtggcggaaatgcacgagcgcattccagtgcagatccaggtg
cgccggcagggcaatgggcagagtgatctacagattgtcggcgggctttcataa
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