Stutzerimonas chloritidismutans: LLJ08_17160
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Entry
LLJ08_17160 CDS
T07923
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LLJ08_17160 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchl03021
]
LLJ08_17160 (rpoA)
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_17160 (rpoA)
Enzymes [BR:
pchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LLJ08_17160 (rpoA)
Transcription machinery [BR:
pchl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LLJ08_17160 (rpoA)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LLJ08_17160 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
AMIN-like
YjbH
Motif
Other DBs
NCBI-ProteinID:
UEG60847
LinkDB
All DBs
Position
complement(3668610..3669611)
Genome browser
AA seq
333 aa
AA seq
DB search
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGIAIKLHGRDEVTLSLVKKGAGAVTAADIQLDHD
VEIVNGDHLIANLAANGSLNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDATFSPVR
RVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VIEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcggtaaatgagttcctgaccccccgccatatcgatgtgcaggtggtcagt
ccgacccgtgccaagatcactctcgagcccctcgagcgtggttttggccacacccttggc
aacgcgctgcgtcgtattctgttgtcctccatgcccggctgcgctgtggtcgaggccgag
atcgacggtgtgctccacgagtacagcgccatcgagggcgtgcaggaagatgtcatcgaa
atcctgctcaacctcaaaggtatcgccatcaagctgcacggccgtgatgaagtgaccttg
agcctggtgaagaagggcgcgggcgctgttaccgctgccgatatccagctggatcacgat
gtcgaaatcgtcaacggcgatcacctgatcgccaatctggcggccaacggctcgctcaac
atgaagctcaaggtcgctcgcggccgcggttacgagcctgctgatgcgcgtcagagcgat
gaagacgaaagccgtagcatcggtcgtctgcagctcgacgccactttcagcccggttcgt
cgcgtggcttacgtggtcgagaatgctcgtgtcgagcagcgcaccaacctggacaaactg
gtcattgacctggaaaccaacggcaccctggatcccgaagaggcgatccgtcgtgcagcg
accatcctgcagcaacagctggctgcgttcgtcgacctcaagggcgacagcgagccggtt
gtaatcgagcaggaagacgagatcgatccgatcctgttgcgtccggttgatgacctggag
ctgaccgtacgttcggccaactgcctgaaggcggaaaacatctactacattggtgatctg
attcagcgcaccgaagtagagctgttgaagacgccgaatctgggcaagaagtccctgact
gagatcaaggacgttctggcttcgcgtggtttgtccctcggtatgcgtctggataactgg
ccgccggcaagtctcaagaaggacgataaggccactgcctga
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