Stutzerimonas chloritidismutans: LLJ08_18570
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Entry
LLJ08_18570 CDS
T07923
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLJ08_18570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchl03019
]
LLJ08_18570
Messenger RNA biogenesis [BR:
pchl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LLJ08_18570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
UEG61106
LinkDB
All DBs
Position
complement(3952258..3952737)
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AA seq
159 aa
AA seq
DB search
MIDSDGFRPNVGIILTNDVGQVLWARRINQDAWQFPQGGINARETPEEALFRELNEEVGL
EEQDVKILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLTSAEERVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLPVRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgactccgatggttttcgcccgaacgtcggcatcatcctgaccaacgatgtcggt
caggtgctgtgggccaggcggatcaatcaggatgcctggcagttcccgcaaggcgggatc
aatgcccgtgaaacgccggaagaagccctgtttcgcgaactcaacgaagaagtcggcctg
gaagagcaggatgtgaagatcctcgcctgcacccgtggctggttgcgctatcgtctgccg
caacgcctggtgcgtacccatagccagccgctgtgcatcggacagaagcagaaatggttc
ctgctgcgcctgaccagcgccgaagagcgtgtacgcatggacctgaccggcaagccggag
ttcgacggctggcgctgggtcagctactggtacccgctgggacaggtggtcaccttcaag
cgcgaggtctatcgtcgcgcacttaaagaactcgcaccgcgtttaccggtgcgggactga
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