Stutzerimonas chloritidismutans: LLJ08_19575
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Entry
LLJ08_19575 CDS
T07923
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03420
Nucleotide excision repair
pchl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LLJ08_19575 (uvrD)
03430 Mismatch repair
LLJ08_19575 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_19575 (uvrD)
Enzymes [BR:
pchl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LLJ08_19575 (uvrD)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LLJ08_19575 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
LLJ08_19575 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_11
AAA_22
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UEG61299
LinkDB
All DBs
Position
4165683..4167872
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AA seq
729 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPLGRQLVLAGAGSGKTRVLVHRIAWLHQVERASLHSIL
SVTFTNKAAAEMRQRIEQLLHVNPQGMWVGTFHGLAHRLLRAHWQEAKLAQNFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWWINAQKDEGLRPRNIQAGGDLFLATQLKIYEAYE
EACARAGVIDFSELLLRALDLWRDHPGLLDHYQRRFRHVLVDEFQDTNAVQYAWLRLLAK
GGESLMVVGDDDQSIYGWRGARIENLHQFSQDFPNAETIRLEQNYRSTACILKAANALIA
NNQGRLGKELWTSGCEGEPISLYAAFNEHDEARYVVESIEKAIRDGMSRSEIAILYRSNA
QSRVLEEALLREKIPYRIYGGQRFFERAEIKNAMAYLRLIQTRDNDAALERVINVPARGI
GEKTVESLRQLARDQGLSMWAALHQAVGTKAVSGRAASALNAFVELVDTLALKVEGMQLH
NMAQLVIEQSGLLAYHRDEKGEKAQARVENLEELVSAARAFDSYSEEDDDVQSPLAAFLD
HASLEAGEQQAGDHEDSVQLMTLHSAKGLEFPLVFLVGMEEGLFPHKMSLEESGRLEEER
RLAYVGITRAMQQLVITYAETRRLYGSETYNKISRFVREVPPALIQEVRLSNTVTRSFSG
KSMSGSSLFDGAGVPETPFSLGQRVRHSLFGEGTILNFEGSGAQARVQVNFEDEGSKWLM
LSYAKLEAL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgatctctctctcctcctgaattccctcaacgatgctcagcgccaggccgtg
gccgcgccgcttggccgccagttggtattggctggtgccggctcgggcaagacccgcgtt
ctggtgcaccgtatcgcctggctgcaccaggtcgagcgcgcctcgctgcactcgatcctg
tcggtgaccttcaccaacaaggctgccgccgagatgcgccagcgcatcgagcagctgctg
cacgtgaacccgcagggcatgtgggtgggcacctttcacggcctggcccaccgcctgctg
cgcgcgcactggcaggaagccaagctggcgcagaacttccagatcctcgattccgacgac
cagcagcgcctggtcaaacgggtgatccgcgaactcggcctcgacgagcaacgctggccg
gcgcgccaggcgcagtggtggatcaacgcgcagaaggacgaaggcctgcgtccgcgcaac
atccaggccggcggtgacctgttcctcgccacccagctgaagatctacgaagcctatgaa
gaggcctgcgcccgcgccggggtgatcgatttctccgagctgctgctgcgcgccctggac
ctgtggcgcgaccacccgggcctgctcgatcactatcagcggcgcttccgccacgtgctg
gtcgacgagttccaggacaccaacgccgtgcagtacgcctggttgcggctgctggccaag
ggcggcgagagcctgatggtggtcggcgacgacgaccagtcgatctacggctggcgtggc
gcgcggatcgagaacctgcaccagttcagccaggatttccccaatgccgaaaccatccgc
ctggagcagaactaccgctccaccgcctgcatcctcaaggccgccaacgcgctgatcgcc
aacaatcagggccgtctcggcaaggagctctggacttccggttgcgagggcgagccgatc
agcctgtacgccgcgttcaacgagcacgacgaagcgcgttacgtggtcgagagcattgag
aaggccatccgcgacggcatgagccgcagcgagatcgccatcctctaccgctccaacgcc
cagtcgcgggtgctggaagaggcgctgctgcgcgagaagattccctaccgcatctacggc
ggccagcgcttcttcgagcgcgccgagatcaagaacgccatggcctacctgcgcctgatc
cagacccgcgacaacgacgcggcgctggaacgggtgatcaacgtgccggcacgcggcatt
ggcgagaagaccgtcgagtccctgcgccagctggcgcgtgatcagggcctgtcgatgtgg
gcggcgctgcatcaggcggtcggtaccaaggcggtttccggccgcgctgccagcgcgctg
aacgcctttgtcgagctggtcgataccctggcgttgaaggtcgaaggcatgcagctgcac
aacatggcgcagctggtcatcgagcagtccgggctgcttgcctatcaccgcgacgagaag
ggcgagaaagcccaggcgcgggtggaaaacctcgaggaactggtctccgccgcgcgcgcc
ttcgacagctacagcgaagaggacgacgacgtccagtcaccgctggcggcctttctcgac
cacgcctcgctggaggccggcgaacagcaggccggcgaccacgaggacagcgtgcagctg
atgaccctgcacagcgccaagggcctggagttcccgttggtgttcctggtcggcatggaa
gaaggcctgttcccgcacaagatgagcctggaggaatccggccgtctggaagaagaacgc
cgcctggcctacgtcggcatcacccgcgccatgcagcagctggtgatcacctacgccgaa
acgcgccggctgtacggcagcgaaacctataacaagatctcgcgtttcgtccgcgaagtg
ccgccggcactgatccaggaagtacgtctgagcaataccgtgacgcgctcgttcagcggc
aagagcatgagtggctcgtcgctgttcgacggcgccggcgtgccggaaacgccgttcagc
ctcggccagcgtgtacgccattcgctgttcggcgaaggcaccatcctcaacttcgaaggc
tccggcgcccaggcccgagtgcaggtgaatttcgaggatgagggcagcaaatggctgatg
ctcagttacgcaaaacttgaagccctgtag
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