Stutzerimonas chloritidismutans: LLJ08_20165
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Entry
LLJ08_20165 CDS
T07923
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pchl
Stutzerimonas chloritidismutans
Pathway
pchl03030
DNA replication
pchl03410
Base excision repair
pchl03420
Nucleotide excision repair
pchl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pchl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LLJ08_20165 (polA)
03410 Base excision repair
LLJ08_20165 (polA)
03420 Nucleotide excision repair
LLJ08_20165 (polA)
03440 Homologous recombination
LLJ08_20165 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchl03032
]
LLJ08_20165 (polA)
03400 DNA repair and recombination proteins [BR:
pchl03400
]
LLJ08_20165 (polA)
Enzymes [BR:
pchl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LLJ08_20165 (polA)
DNA replication proteins [BR:
pchl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LLJ08_20165 (polA)
DNA repair and recombination proteins [BR:
pchl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LLJ08_20165 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LLJ08_20165 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UEG61411
LinkDB
All DBs
Position
complement(4283777..4286521)
Genome browser
AA seq
914 aa
AA seq
DB search
MSQAPLILVDGSSYLYRAFHALPPLTTSTGKPTGAVKGVLNMLLSLRRQYPDSPFAVVFD
AKGPTFRDALFENYKSHRPPMPDDLRSQVEPLHASVRALGMPLLCVEGVEADDVIGTLAR
QCAALGRDVIISTGDKDMAQLVCPHVTLVNTMTGSVYDIEGVKTKFGVGPELIIDFLALM
GDKVDNIPGVPGVGEKTACGLLNGIPGGLKGLYDNLDQVAGLPIRGAKSLGAKLAEHRDA
AFMSYELATIKLDVPLDVEVADLMPGEPHREALIALYRELEFKNWLDDLLREAKAAGENC
EVQPEGCSIQAEAEYTTILDPAEFDAWLERLKNAECFAFDTETTSIDAQRAELVGVSFAV
EPGQAAYVPLRHSYMGVPQQLELDAVLGALKPLLEDPAKTKICQHGKYDMNVLMHYGIEM
RGMTFDTMLESYVLDATATRHDMDSLALKYLGRGTIRFEDIAGKGAKQLTFDQIAIEQAG
PYAAEDADVTLRLHQTLLGKLEQTPSLLKVLTEIEMPLVPVLARIERNGALVDAQLLGQQ
SVELGDKLVQLEREAFDIAGEEFNLGSPKQLCAILYDKLGCPVISKTAGGQPSTAESVLA
ELAEQDYPLPKVIMQHRSLSKLKGTYTDKLPQQINPRTGRIHTSYHQAVTATGRLSSSDP
NLQNIPIRTAEGRRIRQAFIAAPGYQLLAADYSQIELRIMAHLAQDAGLLHAFQNDLDVH
RATAAEVFGVPLEQVSNDQRRSAKAINFGLIYGMSAFGLAKQIDVGRKEAQEYIDRYFAR
YPGVLAYMERTRTQAAEQGYVETLFGRRLYLPEINSKNGAMRKGAERTAINAPMQGTAAD
IIKRAMIAVDGWLQQSGLDARVILQVHDELVLEVREDLVEQVRQQICPLMSEAAQLDVPL
LVEAGVGNNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagctcccctcatcctggtggacggttcgtcctacctctatcgcgccttccat
gccctgcctcctctgaccacctcaaccggcaagccgaccggcgcggtcaagggcgtgctg
aacatgttgctcagcctgcgccggcagtatccggacagtccgtttgcggtggttttcgac
gccaaggggccgacctttcgcgacgcgctgttcgagaactacaagtcgcaccgcccgccg
atgccggatgatctgcgctcgcaggtcgagccgctgcacgccagcgttcgcgccctcggc
atgccgctgctgtgcgtggaaggcgtggaggccgacgacgtcatcggcaccctggcgcgc
cagtgcgcggcgctcggccgcgacgtgatcatctccaccggcgacaaggacatggcgcag
ctggtctgtccgcacgtcacgctggtcaacaccatgaccggcagcgtttatgacatcgaa
ggcgtgaagaccaagttcggcgtcggcccggagctgatcatcgacttccttgcgctgatg
ggcgacaaggtcgacaacattccgggcgtgccaggcgtgggtgaaaagactgcctgtggc
ctgctcaacggtattcccggcgggctcaaggggctttacgacaacctcgaccaggtcgcc
ggcctgccgatccgcggcgccaagtcactgggcgccaagctcgccgaacaccgcgacgcc
gccttcatgtcttatgagctggcgaccatcaagctcgacgtgccgctggacgtcgaggtc
gccgacctgatgcccggcgagccgcaccgcgaggcgctgattgcgctgtaccgcgagctg
gaattcaagaactggctggacgacctgctgcgcgaggccaaggccgcgggcgagaactgc
gaggtgcagcccgaaggctgctcgatccaggccgaagccgagtacaccacgatcctcgat
ccggccgagttcgatgcctggctcgagcgcctgaagaacgccgagtgcttcgccttcgat
accgaaaccaccagcatcgatgctcagcgcgccgagctggtcggcgtgtcgttcgccgtc
gagccgggccaggcggcctatgtgccgctgcgtcattcctatatgggtgtgccgcagcag
ctcgagcttgatgccgtgcttggcgcgctcaagccgctgctggaggatccggcgaagacc
aagatctgccagcacggcaagtacgacatgaacgtgctgatgcactacggcatcgagatg
cgcggcatgaccttcgacaccatgctcgaatcctacgtgctggacgccaccgccactcgc
cacgacatggatagcctggcgctgaaatatctcggccgtggcaccatccgtttcgaggac
atcgccggcaagggcgccaagcagctgaccttcgaccagatcgccatcgaacaggccggc
ccctacgccgccgaggacgccgatgtcaccctgcgcctgcaccagaccttgctcggcaag
ctggagcagacgccatcgctgctcaaggtgctgaccgagatcgagatgccgctggtgccg
gtgctggcgcgcatcgagcgcaacggcgcgctggtcgatgcgcagttgctcggccagcag
agcgtcgagctgggcgacaagctggtgcagctggaacgcgaggccttcgatattgccggc
gaggagttcaacctcggctcgcccaagcagctctgcgcgatcctctatgacaagctcggc
tgcccggtaatctccaagaccgccggcggccagccgtccaccgcggaaagcgtgctggct
gaactggccgagcaggattacccgctgcccaaggtgatcatgcagcaccgctccttgagc
aagctcaagggcacctacaccgacaagctgccgcagcagatcaacccccgcaccgggcgc
atccacaccagctaccaccaggcggtgaccgccaccgggcggttgtcttccagcgatccg
aacctgcagaacatcccgatccgcaccgccgagggccggcgtattcgccaggccttcatc
gcggcgccgggctaccagctgctggcggccgactactcgcagatcgagctgcgcatcatg
gctcatctggcgcaggatgccggtctgctgcacgctttccagaacgacctcgacgtgcac
cgcgccaccgctgccgaggtgttcggcgtgccgctggagcaggtcagcaatgaccagcgc
cgcagcgccaaggcgatcaacttcggcctgatctacggcatgagcgccttcggcctggcc
aagcagatcgacgtcggccgcaaggaggcgcaggagtacatcgaccgctatttcgcccgc
taccccggcgtgctcgcctatatggagcgcacccgcacccaggccgccgagcagggctat
gtcgagacgctgttcggccggcgcctgtacctgccggagatcaattcgaagaatggcgct
atgcgcaagggcgccgagcgcaccgcgatcaacgcgccgatgcagggcaccgcagcggac
atcatcaagcgcgccatgatcgccgtggacggctggctgcagcagagcgggctggatgcg
cgggtgatcctgcaggtacacgatgaattggtgctggaagtgcgcgaagacctggtcgag
caggtccgccagcagatctgtccgttgatgagcgaggcggcccagctggacgtaccgctg
ctggtcgaagcgggcgttggcaacaactgggacgaggcgcactga
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