Pochonia chlamydosporia: VFPPC_00205
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Entry
VFPPC_00205 CDS
T09407
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor rrn3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_00205
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
VFPPC_00205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF2293
Motif
Other DBs
NCBI-GeneID:
28844271
NCBI-ProteinID:
XP_018148248
UniProt:
A0A179G2R6
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Position
1:925495..927564
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AA seq
689 aa
AA seq
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MRPFTPNARVLPGHLPRAATPVKSILKPASVLGRRKNLDDDIESSPTAAPESPTKRRKVL
FDDIRNVTYEVGRRTMDDVKLEVRAALEAHLRGNDGQYDMLKELFANDKQRYLPPVVGEE
DDTLKPHELQVYVMALTSCIPILKGRQCNGLVRTILKCSWLGRDAAFTKVFTHFLAALVS
AQGSYLVPVLSMMVDKFRDTRPSSWSVPDFPEVSRVIMRDRLHSGIQYILQMFPSAAAVL
ENLLSSKFPFPDESVRVHMAYIHNLLQVKKYVPALQDDILDLILNRVVKIDSQMQVDLED
LDDDVTAAVMYALRENPRQPSAWEDDDSDDSDNESVDSEDLDYDQDAVRIKTVKESVEKM
DAVLDTLFSVYSPHFDNPGSDRAFDMFTTILREFDHMVLPTYKSRHTQFLIFHFAQQHER
LTDAFCGQLMATAFQSNTPNVLKQAAAAYLASFVARGAHVPPSLVRTMFDLLLHHLEQYR
RKYEPLCRGPDLKRFHPYYSLVQATLYIFCFRWQDLVVSAPEVVDPEDPASYIGQDLEWM
GSCRKDLSVQIFGKLNPLKVCAPVIVEEFAKLAHRLNFMYVYPLVESNKRVRLTQFLSAT
YATGGALRDAGYEGQEESFHQLDPYFPFDPYQLPISKRWLADDYVHWKSVPGLNEERDED
SDDMDEEDDDDEQLEEQTATDSDGDGYQL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcgaccgttcacgccaaacgccagggtccttcctggccatttacctcgagctgcgacg
ccggtaaagtcaatactcaagcctgcctctgtgctcgggaggagaaagaatttggacgac
gacatcgagtcttcacccacagcggccccggagagcccgacaaagcgacgaaaagtgctt
tttgacgacattcgaaatgtaacgtacgaagttggccgcagaacaatggacgacgtcaaa
ttggaagtacgggctgcgctggaggcccatctccgggggaatgacggccaatatgatatg
ttgaaggagttatttgccaatgacaaacaaagatacctgcctcccgtggtaggagaagaa
gatgatacacttaaaccacacgagctccaagtctacgtaatggctttgacgagctgcata
ccgattctgaaaggaaggcaatgtaatggtttggtcaggacgattttgaagtgttcctgg
ctgggacgcgacgctgcctttacaaaggtctttacacatttcttggccgccctcgtcagc
gcacagggatcttatcttgtaccagtcctgtcaatgatggtggacaagtttcgcgatact
cgaccgtcatcgtggagcgtgcccgacttcccagaggtcagcagggtcatcatgcgcgat
cgactacactctggcatccagtatattttgcagatgtttccttctgcggcagccgttctt
gaaaacttgctcagctccaagttccctttccccgacgaatcagtacgggtacacatggcc
tacatccacaaccttctccaggtcaagaagtacgtgcctgctttgcaggacgatattctg
gatctcattttaaaccgagtcgtcaagattgattcccagatgcaggtggacctagaagat
ctggacgatgatgtaaccgcggccgttatgtacgcgctgcgggagaatccgcgacagcca
tcagcttgggaggacgacgactctgatgacagcgacaacgagtccgttgacagcgaagat
ttggactacgaccaagacgcagtgagaatcaagactgtcaaggagagtgtcgagaagatg
gatgctgtcttggacacgctcttctcagtctacagcccgcattttgacaatcccggatcc
gacagggcgttcgacatgtttacgacgatccttcgcgaatttgatcacatggtattgcct
acctataaatcaagacatacgcagtttctgatattccacttcgcgcaacaacacgaacgc
cttaccgatgcgttctgtggccagcttatggcgacggcgtttcaatcgaacacgccaaac
gtcttgaagcaagctgcagcagcatatcttgcaagctttgtggcccgcggagcacatgtc
ccgccgagtttagtgcgaaccatgttcgatttattgcttcatcatcttgagcaatataga
agaaaatacgagccgctgtgtcgcggaccagatctgaagagatttcacccatattattcg
cttgttcaagctactttatacatcttttgctttagatggcaagacttggttgtatctgct
ccggaagtcgtggacccagaggatccggcgtcatatattggccaggacctagaatggatg
ggatcttgcagaaaggacctatccgtgcagatattcggcaagctgaatccactcaaggtg
tgcgcacctgttatcgtggaagagtttgcgaaactagcacaccgtctcaattttatgtac
gtttatccgctggtggagagcaacaagcgggttcgattgacgcagtttttgtcggcgacg
tacgcgacgggtggtgcgctacgagatgccgggtacgagggacaagaagagagcttccac
caattggacccatacttcccgttcgatccataccagctgccgattagcaagcgatggctt
gcggacgactacgtgcactggaagtcggtgcctggactgaacgaggagagggatgaggac
agcgacgacatggacgaagaggatgacgatgacgagcagctggaggagcagacggcgaca
gacagcgacggtgatgggtatcagttgtga
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