Pochonia chlamydosporia: VFPPC_00288
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Entry
VFPPC_00288 CDS
T09407
Name
(RefSeq) RNA exonuclease Rex2
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VFPPC_00288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_00288
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_00288
Messenger RNA biogenesis [BR:
pchm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VFPPC_00288
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-60S particles
RNases
VFPPC_00288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
28844329
NCBI-ProteinID:
XP_018148358
UniProt:
A0A179G329
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All DBs
Position
1:complement(1270445..1271145)
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AA seq
197 aa
AA seq
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MASGLVAPHSGVTDDPLVWIDCEMTGLNPDTEEIIEIYCIITTGNLEVMDQEGYHAVIHL
PAARLDQMDEWCTRTHGNSGLTGAVLASTTTPEEAADGLYDYIRKFIPEKRKALLAGNSV
HADRAFLRKQPYDKVIDHLHYRILDISAIKEAGRRWCPREVMDQAPAKKGRHLARDDILE
SIEEAKYYRDAIFRRGL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggacttgtcgccccgcattcgggtgtaactgatgatcctcttgtctggatt
gattgcgagatgacagggctgaacccagacacggaagaaattattgaaatatattgcatt
atcaccacgggaaacctggaagtgatggaccaagaaggctatcacgcagtcattcacctt
cctgccgcccggctggaccagatggatgaatggtgtactcgcacacatggcaactctgga
ctgaccggtgccgttctggcatcaacgacaacgccggaagaggctgctgatgggctgtac
gactacattagaaagttcatacccgaaaagcgcaaagctttgctcgccgggaacagcgtc
catgctgatagagcgtttttgcgtaaacagccttacgacaaggtaatcgatcacctacac
taccgtatcctggacataagcgccatcaaggaagctggtcggaggtggtgtccacgggag
gtgatggaccaggcgcctgcaaagaagggaagacatttggccagagacgatattctggag
agtatagaagaggccaagtattatcgggatgctatttttcggcgaggattgtaa
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