Pochonia chlamydosporia: VFPPC_00661
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Entry
VFPPC_00661 CDS
T09407
Name
(RefSeq) transcription initiation factor iif
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_00661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_00661
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
VFPPC_00661
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
DUF6586
Motif
Other DBs
NCBI-GeneID:
28844632
NCBI-ProteinID:
XP_022284687
UniProt:
A0A179G5M3
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Position
1:complement(2627469..2628717)
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AA seq
375 aa
AA seq
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MAESGYIKPDPEDEKVMPPPMAMEEDELFEDAGDLEFYDKSPGSSFETLYLARVPKYMWD
AWTKLVEGLGDDDEIQIGTLRTWNEPVPDASIEGGTRNETKLRMLLQANCPEHQALPREY
DLEILDRDVKNHFIFSEEDLPGYKEKNKARADAAAAGIPQSILRQRQNQGVERTERTYDR
RNRYQPYYRKAIPKRTKVFGKIHYDVRVEPRNIQEEERLLARRLLDAETSKTKLQIISRN
SASSIINPGTAGSATWGGGFIKNAPPTVKAKKGEVFKAARIPKNQLLDLIFDCFRQYQYW
SMKALRQKLQQPDSYLRQVLEEVAVLHKSGRFANHYGLNDAYKDKAGNDAKEEAAEAVDD
GDDDENEEMEDVLPA
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatcaggatatataaaaccagatccagaggatgaaaaggtgatgccgccgcca
atggccatggaggaggatgagttgtttgaggacgcaggcgacctcgagttctacgacaag
agcccaggcagcagcttcgaaacactgtacctcgcgcgcgtgcccaagtacatgtgggat
gcgtggacgaagctcgtagaagggctgggcgacgacgacgagatacagattggcaccctg
cggacgtggaacgaacctgtacccgacgcgtccatagaaggcggcacgcgcaacgaaacc
aagcttcgcatgctgctgcaggccaactgccctgaacaccaggcacttcctcgcgaatac
gacctggagattctggaccgagacgtcaagaaccacttcattttcagcgaggaggatctg
ccggggtacaaggagaagaacaaggctcgcgcggacgctgccgctgcggggatccctcaa
tcgatcctgcggcaaaggcagaaccaaggcgtcgaacgaacggagaggacatatgatcgg
aggaacagataccagccatactaccgcaaggctattcccaaacggacaaaggtcttcggc
aagatacattatgatgttcgcgtcgaaccccgaaatatccaggaagaggaacggctactc
gccaggagactcctcgacgccgagacgtccaagacgaaactccaaattatcagcaggaac
agcgcatcctccatcatcaacccaggtacagctggatctgctacctggggcggaggcttc
atcaaaaatgcaccacccaccgtcaaagccaaaaagggcgaagttttcaaggctgctcgt
attcccaagaaccagcttttggatctcatcttcgattgtttccgtcagtatcagtattgg
tctatgaaggccttgcgtcaaaaactgcaacagcccgactcctacctccgccaggtgctc
gaagaggttgcggtgctgcacaagagcggccgctttgccaaccactatggcttgaatgat
gcgtacaaggataaagctggaaacgacgctaaggaagaggctgcagaggctgtggatgat
ggggacgacgacgaaaatgaggaaatggaagacgtgttgccagcataa
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