Pochonia chlamydosporia: VFPPC_00670
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Entry
VFPPC_00670 CDS
T09407
Name
(RefSeq) CPL (NUC119) domain-containing protein
KO
K14844
pumilio homology domain family member 6
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_00670
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_00670
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
VFPPC_00670
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VFPPC_00670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
Motif
Other DBs
NCBI-GeneID:
28844640
NCBI-ProteinID:
XP_022284688
UniProt:
A0A179G4L5
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All DBs
Position
1:complement(<2658896..>2661013)
Genome browser
AA seq
685 aa
AA seq
DB search
MAAKPVAAGNKRKATPSSKGRSDSKKARVEDAKAQAKAQASSDDSSDSDSEDGGVELNAG
DEQKPFKKTDAGANGNAFDRTGLTSRESHAKQKQLAQERKAAKPLADEVQRTKKIWERLR
RKSHVPKEERQTLVEELFGIITGRCRDFVLKHDAVRAVQTAIKYATPDQRKQIARELEGS
YAQLAESKYAKFLIGKLLVHNDDEIRDLVIPNFYGKVRKLINHPEAAWILDDIYRTVATK
EHKAILLREWYGPQFSIKELTKDTKPTADLKEILAAEPSKRGPIRKTLLDMVNSLVQKRM
TGFTMLHDAMLQYFLTTQPGSEEFSEFAEMVKGDESGDLLKNMAFTKSGARLSCMLLAYG
SAKDRKQYLKVYKDTLVLMSGDQYAHLVILTAYDVIDDTKLTAKSIFPELIGENEDEQAQ
NIVGTANNPNARTTFLYLFEGLSKSLFPASHSFDIEVLKEVHEIRKTTSKKDEDIRQQEL
IAALSPQLLSVMEKVASDLTSTAFGCQFITDALLSGTGDKTKVLEAIAQSAAGDPKEASS
EEDGINAVPHISATPFGGRMLKSLIQGGRFDKAAGKIIPADPPLNFADTLYPVIKDYVID
WATGPSSFVVVGLMESSDFGNTDELKKTLKKNKKVLEKAASEMTPEQKAAREAQEEKADK
GSKKGKKRSDGPVGNAGSKLLLEKL
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaacctgttgccgcaggaaacaaaagaaaggccacgcccagtagcaaaggc
aggtctgattccaaaaaggctcgagtggaagacgccaaggctcaagcgaaagctcaagcg
tctagcgacgattcgtccgattccgactctgaagatggaggcgtcgagttgaacgctggg
gatgagcaaaagccgtttaaaaagactgatgcaggtgccaatggcaacgcatttgatcgc
accggcctcacgtcacgagagtcccacgcaaagcaaaagcaattggcgcaggaacgaaaa
gcggcaaagccccttgccgacgaagtgcagcgcaccaagaagatttgggaacggctgagg
agaaagtcccacgtccccaaggaggagcgacaaacgctggtggaggagctgtttggcatc
attaccggccgctgcagagactttgtcctcaagcacgacgccgttcgtgccgtgcagacc
gctatcaagtatgccacaccggaccagagaaaacaaattgcgagagaactcgagggaagc
tatgctcagcttgccgaaagcaagtatgccaagtttttaattggcaagttgctggttcac
aacgacgacgaaatccgtgatctcgtcattcccaacttttacggcaaggttcgaaaactc
atcaatcatcccgaagccgcgtggattctcgacgatatctaccgcaccgttgccacaaag
gagcacaaggccattttgctgcgggaatggtacgggccacaattcagcatcaaggaactg
accaaggataccaagcccaccgcggatctgaaggagattctcgcggcggagcccagcaag
cgcgggcccatcagaaagactctgttggatatggtcaactcgcttgtccagaagcgcatg
actggcttcaccatgctccacgacgccatgctgcagtactttctcacgacgcagccggga
agtgaagagtttagcgagtttgccgaaatggtcaagggagatgagtctggagatttgctc
aaaaacatggcctttaccaagtctggcgcgcggctctcgtgtatgctgctagcctacggc
tccgccaaggacaggaagcaatatctcaaggtgtacaaggacacgctggttctcatgtct
ggcgaccaatatgcccacctggtcatcttgacagcttacgacgtcattgacgacaccaaa
ctcacagccaagtcaatattcccagagttgattggcgaaaacgaggacgagcaagcgcaa
aatattgtcggaaccgccaacaaccccaacgccagaacaacttttctctacttgtttgaa
ggcctttcaaaatctttgttccctgccagccactcatttgacattgaagtcttgaaagag
gtgcacgagattcgcaagacaactagcaaaaaggacgaggatatccgacagcaagagctc
attgccgctctctcaccacagctactctccgtcatggaaaaagtcgcctccgatttgaca
tccaccgcctttggatgccagttcatcaccgacgctcttctgtcgggtactggtgacaag
accaaagtcctcgaagccattgcccagtcggcggcgggcgatcccaaggaagcgtctagt
gaagaagacggcatcaatgctgttcctcacatttcagccacgccttttggtggccgcatg
ctcaagtctctgatccaagggggtagattcgacaaggcagctggcaagatcatccccgcc
gaccctccactcaactttgccgatactctgtacccagttatcaaggactacgttatcgac
tgggccacaggaccgagctcctttgttgtagttggtctcatggagtcgagtgattttggc
aatactgatgaattgaagaagacgctcaagaagaacaaaaaggtgttggaaaaggctgct
tcggagatgacaccggagcaaaaggccgccagggaggctcaagaggagaaggcggacaag
ggtagtaagaagggtaagaagagatcggacgggccagttggtaatgctggcagcaaacta
ttgttggagaagctgtga
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