Pochonia chlamydosporia: VFPPC_00802
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Entry
VFPPC_00802 CDS
T09407
Name
(RefSeq) chromosome transmission fidelity factor
KO
K10754
replication factor C subunit 1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03030
DNA replication
pchm03410
Base excision repair
pchm03420
Nucleotide excision repair
pchm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFPPC_00802
03410 Base excision repair
VFPPC_00802
03420 Nucleotide excision repair
VFPPC_00802
03430 Mismatch repair
VFPPC_00802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_00802
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_00802
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
VFPPC_00802
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
VFPPC_00802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
nSTAND3
AAA_22
AAA_18
AAA_16
AAA_5
AAA_33
AAA_14
AAA_28
BRCT_2
NTPase_1
RuvB_N
AAA_17
Motif
Other DBs
NCBI-GeneID:
28844745
NCBI-ProteinID:
XP_018149057
UniProt:
A0A179G540
LinkDB
All DBs
Position
1:3150715..3154029
Genome browser
AA seq
1032 aa
AA seq
DB search
MPDIRSFFTAKGGAAPKPAPPKSEDTLKGKRSKSRKVVEDSDEEEAVETKPAVKAAPKKK
KTTSEPQGVAISADDYFASSKKTTDPKNSTPKKASSKAQVKDEMPVRSSPRNKQPVPKSE
PVVQNGSPPKKKPTTSYKKHHLDDDDDAYMDDAEEDGDDIFAADAKGRSKRKNDDYADEE
SEEEVLPRAKRVASRGQAVPDTVTQGGNRAASTASRKRKSPVQESDEEEEEELPRKKPTA
AKPRAPRAKKADEPEDAQIQDILDSVATVRPPTPPPKDPNAKFDWRKAAAGGGNASAQPM
GTADIPDGAEECLSGLSFVFTGVLQTIGRDEAQALVKRYGGKVTGQPSSKTSFVVLGDDA
GPSKLAKIKSHGIKTIDENGLFDLIRKLPAYGGTGKGAQKAQEKKKAEEDKVKQQIAEME
AEEKKRKAEAAKTAQKAASARGVAPSSQPLPAQAAQLLTSKYAPTQLSHICGNKAQVEKI
QAWLRNWPKAKKYNFQRRGADGLGGERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNAS
DVRSKKLVENGVSDVMNNTSLLGYFAGDGKSVDAAKKKIVLVMDEVDGMSAGDRGGVGAL
AKFCKKTEVPLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREGLRLPP
PVVDALIEGSNKDIRQIINMISTAKLDQTTMNYDQGKAMTKAWEKHVVLKPWDICQKMLG
GGLFAPASKATLNDKIELYFNDHEFSFLMIQENYLRTKPMMLNGKGYNKREEKLKALELF
DQAAESISDGDLVDRMIHGPQQHWSLMPTHAIFSTVRPASFISGQLIGSNFTSWLGNYSK
QGKLGRYIREIHSHMRLKSSGDHNEVRQQYLPVLWKQLVNRLESEGNDAVPEVIELMDSY
FLTREDFDAIQELGVGPMNEEKVSIETKTKAAFTRTYNSMNHPVPFMKASSVVAPKKQTK
DAPDLEEAIEEEDDGQAAEAPDVDDDEIDLKKDKYIKQPKKKPAKKAAKAAGDDDDDDKP
KSKGKGRGKAKK
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcgatccttctttaccgcaaagggtggtgcggctcctaaaccagcacca
cccaagagtgaagatacactgaaagggaagcgatcaaaaagccgaaaagttgtcgaggat
agcgatgaagaggaagctgtggaaaccaagccggccgtaaaggcggcacccaagaagaaa
aagactacttcggaacctcaaggagttgctatatccgcggacgactactttgcttcatcc
aagaagactacagaccccaagaattcgacaccaaaaaaggcaagttcgaaagcacaagta
aaggatgaaatgcccgtgagatccagtccacgaaacaaacaaccagtccccaaatcagag
ccagtggtacaaaatggttcaccaccgaaaaagaagccgaccacctcttacaagaaacac
catcttgatgacgatgacgacgcatatatggatgacgcggaggaagacggggacgacatt
ttcgccgccgatgccaagggtcgaagcaagcgcaaaaatgacgactacgctgacgaagag
tccgaagaagaggtgctgccaagggccaaacgggtcgcctctcgcggccaagctgtacca
gacacagtcacccaagggggcaatcgcgccgcttccacagctagtaggaagcgcaagtcc
cctgtgcaagagtcagatgaggaggaagaggaagagctgcctcggaagaagccaaccgcg
gcgaaacctcgtgcaccccgagcgaaaaaggcagacgaacctgaagatgcgcaaatccaa
gacatcctggatagcgtggccactgtcagacccccgacacctcccccgaaggaccccaat
gccaagtttgattggagaaaggcggctgctggaggtgggaatgcatcagcccaacccatg
ggcaccgccgacatcccagatggtgcggaggagtgcctctctggattgtcgtttgtcttc
acgggtgtcttgcagacgatagggcgagacgaagcccaagcactcgtcaagcgctatgga
gggaaagtgactggccagcccagcagcaagactagttttgttgttctcggtgatgacgcc
gggcctagcaaactagccaaaattaagtcccatggcatcaagacgattgacgaaaatggc
ctctttgatctgattcggaagctgcccgcctatggtggtaccggcaaaggagcacagaag
gctcaggagaagaaaaaggccgaagaggacaaggtgaagcagcagattgcggaaatggaa
gcagaggagaagaaacgcaaagcagaagctgccaagacggctcagaaagccgccagtgct
cgaggcgttgcaccatcatctcaacctcttcccgctcaagccgcccaactcctcacatca
aagtatgccccgactcagctgagtcacatttgtggcaacaaagcacaggtggaaaagatt
caagcttggcttcggaattggcccaaggctaaaaagtacaactttcagcgtcgaggagca
gatggtttaggcggagagcgagccattatcatttctgggccacctggaattggtaaaact
acggccgctcacctggcagccaagttggaaggctatgatgtactggagagcaacgcaagt
gatgtgaggagcaagaagttggtcgagaacggcgtgagcgatgtcatgaacaacacgtca
ctgttgggatactttgcaggcgatggaaaatcggttgatgcggcaaagaagaagattgtt
ctcgtcatggacgaggtggatggcatgtctgctggtgaccgcggtggtgttggtgccctg
gccaagttttgcaagaagacagaagttccgttgattctcatttgcaacgaacgtcgactg
cccaagatgaagccatttgaccacgtcgctttcgacataagattcaaccgacctacggtt
gatcaagtgcgatcgcggattatgaccatttgccatcgcgagggcctcaggctgcctcca
ccagttgtcgacgccttgattgagggcagcaacaaggatattcgacagattatcaacatg
atttcgacggcgaaactcgaccaaacgacgatgaactacgatcagggcaaagccatgacg
aaagcctgggagaagcatgtggtgctgaagccttgggatatttgccaaaagatgcttgga
ggcggcctctttgcaccagcgagcaaggctactctgaatgataagattgagctgtatttc
aacgatcacgaattcagcttcctcatgatccaagagaactatttacggaccaaaccgatg
atgttgaatgggaagggatataacaagcgagaagaaaagctgaaagcccttgagcttttc
gaccaggcagcggagagtatcagcgacggtgatctcgttgatcgcatgattcacggaccg
caacagcactggagcctgatgcctactcacgcgatattcagcacagtccgcccggcaagt
ttcatctctgggcagctcatcggctcaaactttacatcctggctgggcaactatagcaag
cagggcaaactggggagatatatccgcgaaattcactcgcacatgcgtctcaagtcttct
ggcgatcacaacgaagtgcggcagcagtacttgcctgttctgtggaagcaacttgtgaac
cggctggaaagcgaaggcaatgatgcggtacctgaggtgattgagctcatggacagctat
ttcctcacgagagaggatttcgacgccatccaggagcttggtgttggaccgatgaatgag
gaaaaggtttccattgaaaccaagaccaaggcggctttcaccagaacgtataactcgatg
aaccacccggttccgtttatgaaggctagcagtgtcgttgctcccaagaagcagacaaag
gatgcgcctgacttggaggaggcaatcgaagaggaagacgacggacaagcggctgaagcg
ccggacgttgacgatgatgagattgatctcaagaaggacaagtatattaaacagcccaag
aagaagcctgccaagaaggcagccaaagcggcaggtgatgatgacgacgacgacaaacct
aagagtaaagggaaaggtagaggaaaggcgaagaagtaa
DBGET
integrated database retrieval system
