KEGG   Pochonia chlamydosporia: VFPPC_00869
Entry
VFPPC_00869       CDS       T09407                                 
Name
(RefSeq) CC1-like family splicing factor
  KO
K13091  RNA-binding protein 23/39
Organism
pchm  Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchm03041]
    VFPPC_00869
Spliceosome [BR:pchm03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    VFPPC_00869
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded RRM_PARP14_3 RRM_3 RRM_7 PHM7_cyt RRM_5
Other DBs
NCBI-GeneID: 28844799
NCBI-ProteinID: XP_018149145
UniProt: A0A179G5G5
LinkDB
Position
1:3393046..3394933
AA seq 566 aa
MSGLDVEALLEATAQSAAQPNSNTQIDDSSRSDRNGRAQNGSEREGSKSRDDSRDRGRDA
DNDRRRRDRRDSPTRHRKGTPGETTPRSDTGSHRSRRRSESRDRDRYNSRRHRDGDYYRG
RRGRSRSRSRSPRRRYRPRDDRDRRDRRERSDRRDQGRGRDQSPGKRSRSPKLNEDERDS
RTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGVGYVEFKDEETVQKAL
QLTGKPLAGIPIIVKLTEAEKNRQARNTEASSGHPNSIPFHRLYVGNIHFNVTEQDLQAV
FEPFGELEYVQLQKDDNGRSRGYGFVQFRDATQAREALEKMNGFDLAGRPIRVGLGNDKF
TPESTANLMHRFSGQNNFQGSAFSGAGGRGGQSSTFDRAGGRDSDKAGGASALDDTDVAG
VNFNNYSRDALMRKLARTDEIPNGREDQAVVKPKTEAKPLPVNVNMASRCVVLHNMFDPE
EEEGDDWVKELEDDIRSEAERQYGHVVHIAVDPNSKGDVYLKFDKVQGGENAIKGLNGRY
FGGRMINASPVVDAVYSSLFSRTRAI
NT seq 1701 nt   +upstreamnt  +downstreamnt
atgtcgggcttggatgtcgaggccctcttggaggccacagctcaaagtgcagcacagcca
aattccaatactcagatcgatgactcttccagaagcgaccggaatggtcgcgctcagaac
ggatctgagcgcgaaggctccaagagccgcgatgatagccgcgatcgtggcagagacgct
gacaatgatcgccgtcgacgtgatcgtcgagattctcctacaagacatcgtaagggcact
cctggcgaaaccaccccacggagtgatactggaagccaccgcagtagacgccgcagcgaa
agccgggatagagaccggtacaactcacgccgacacagggacggtgattactatcgtgga
cgacgcgggcgatcccgctcccgctcaagatcccctcgtcggcgttatcgccctcgagat
gaccgagatcgtagggaccgccgcgagcgctctgaccgccgagaccagggtcgaggacga
gatcaatccccgggcaaacggtctcgttcacccaagttgaatgaagacgagcgggacagc
cgaaccgttttcgttcagcagcttgctgctcgtttgcgaagtgacaagctaaaacgattc
ttcgaagagaatgccggtccagtaaacgaggctcagattgtcaaggacagaatcagtgga
cgatccaagggagttggttacgttgaattcaaggacgaagaaacggttcaaaaggcactt
cagctcactggaaagccattggcaggtattcctattattgtcaagctcacagaagctgag
aagaatcgacaagctcgcaacaccgaagcgtccagtggacacccgaactctattccgttt
catcgcctatacgttggtaatattcacttcaatgtcacggaacaggacctgcaagccgtc
tttgaaccattcggtgaactcgaatatgtccagcttcagaaggacgacaatggtcgcagc
cgtggatacgggtttgttcaattccgtgatgcaacccaggctcgcgaggctttggaaaag
atgaacggctttgaccttgcaggccgacctatccgagtcggtctgggcaacgataagttt
acccctgagagcacggccaacttgatgcataggttttcaggacagaacaacttccagggc
tctgcgttctcaggagcaggaggccgcggtggccagtcttccacgtttgacagagccggc
ggccgagacagcgacaaagccggcggcgccagcgccctcgacgacaccgatgtcgcagga
gtaaactttaataattacagtcgcgatgcattgatgagaaaacttgccagaaccgacgag
atacctaatggaagagaagaccaggccgttgtgaaacccaagactgaagcgaagccactt
cctgtcaacgtcaacatggctagtcgctgtgtagttctgcacaacatgttcgaccctgaa
gaggaagaaggtgatgattgggtcaaagaactcgaagatgacatccgatcagaagccgag
aggcagtatggacatgtcgttcacattgctgtcgatcctaactccaagggtgacgtttat
ctcaagttcgacaaagtccaaggcggtgaaaatgcaatcaaaggcctaaacgggagatat
ttcggcggaaggatgattaatgcatctccggttgtcgatgctgtctatagcagtctcttc
tcccgcaccagagccatttaa

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