Pochonia chlamydosporia: VFPPC_00978
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Entry
VFPPC_00978 CDS
T09407
Name
(RefSeq) meiotic recombination protein Ski8/Rec14
KO
K12601
superkiller protein 8
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VFPPC_00978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_00978
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
VFPPC_00978
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
WD40_like
eIF2A
WDR54
Nup160
MIOS_WD40
Nucleoporin_N
PALB2_WD40
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
28844885
NCBI-ProteinID:
XP_018149287
UniProt:
A0A179G5U8
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Position
1:complement(3818056..3819219)
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AA seq
318 aa
AA seq
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MSKQYLTTHTVDDAHITDIFSIATTPRAVLSAGGSSTLHVHDTTDPSFPLKQSISNAHKL
GCHHICTSRNGKVAASAGFGGEVKLWALNQDTGEWSSSGEITGPSVKPGEVWAVALSEDG
SYLASTTNDGRINVWDVTGDNQTKIQEYETGSPGSGSFGMSVDLSRDGKYTASGHQNGAV
YIFNNDTGRILYSLSGLAKPVRAVAFSPASTRLAAAGDAGIIALYDMKHGEHVGNLTGHS
SWITTIDWSDTGEFLLSGSMDGKVKVWSIERSACVATHSETDKALWAARWLPKTGKSEMF
CTAGANRSLTFYREATGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcagtacttgaccacgcacacagtggatgatgctcatatcacagatattttc
tcaatagctacgactccaagggcagtcctctcagcaggcggctcttcaaccctccatgta
cacgacacgacagacccttcattccctctgaagcagtccatctccaacgcccacaagcta
ggttgccaccacatctgcacgtcgagaaatggaaaagttgcagcaagcgcgggcttcggg
ggagaggtgaaactgtgggcattaaaccaagacactggcgagtggtcaagcagcggtgaa
atcactggaccgtcagtcaaacccggtgaggtgtgggcagtggcactgagtgaagacggg
tcatatctagccagcactaccaacgacggacgcatcaacgtctgggatgtcacaggcgac
aatcagaccaagattcaagagtatgagacaggcagtcctgggtcagggagcttcggcatg
agcgtcgatctcagcagagatggcaaatacaccgccagtgggcatcaaaacggagcagtg
tacattttcaacaacgacacggggaggatcttgtattcactatctgggttggcgaagcct
gttcgagcggtagccttctcgcctgcgagtacaagactggctgctgctggtgatgcggga
atcattgccctctatgacatgaagcatggcgagcatgtgggcaatctcactggacattct
tcatggattacgactatcgactggagtgatacgggggagtttttgctcagcggctccatg
gatgggaaggtcaaagtgtggtcaattgagcgcagtgcctgtgtggctacgcatagtgag
acagacaaggcgttatgggcggcgagatggcttcccaagactgggaagagcgagatgttc
tgtactgcgggtgcaaataggagcctgactttctatcgtgaggcaactggtggttga
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