Pochonia chlamydosporia: VFPPC_01206
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Entry
VFPPC_01206 CDS
T09407
Name
(RefSeq) ATP dependent RNA helicase (Dbp9)
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_01206
Enzymes [BR:
pchm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VFPPC_01206
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-60S particles
Helicases
VFPPC_01206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CDC45
Motif
Other DBs
NCBI-GeneID:
28845067
NCBI-ProteinID:
XP_018149593
UniProt:
A0A179G7M5
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Position
1:complement(4676045..4678108)
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AA seq
614 aa
AA seq
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MKRKLDQNGVPSPEPENQKRTKSETESPADAELTFADLGLDPRLVQAVAEQKFLKPTLVQ
RKAIPLALNGKDVLCKSKTGSGKTAAYILPVLSAILKKKSNESVAATTALILVPTRELAD
QVFKVIEQFSTFCAKDVRAVKLTDKLSDAVQRSLLSTNPDIVISTPARAWYNVKSNQSAL
SLDKLTHLVLDEADLLLSYGYDEDLENLSWSIPKGIQTTMMSATLTAEVDSLKKIFYRDN
APTLLDLEEPDEEGEGVTQLVTKCAEDEKFLLAYIIFKLQLVKGKCIIFVGDVDRCYRLK
LFFEQFGIRSCILNSELPVNSRIHVVEEFNRNVYDIIIASDEKEVLGNEEKADEEENNEG
AENADSDAEKEEQRPKKKRKGSKRDKEYGVSRGIDFKNVAAVINFDLPTSASSYTHRIGR
TARAGKAGMALSFVIPKEQFRKHMPTTIQSAENDEKVLARITRQQAKKGKEIKPYNFNTK
QVEAFRYRMNDALRAVTKVAVREARTRELRQELLKSEKLKRYFEENPSEINHLRHDGELR
TARQQAHLKHIPEYLLPENGKKGLTESDIGFVPLRKPGKLRGQRKGKGTKRGGFRVGGRK
GDPLKTFKARRRAK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaagctcgatcagaatggcgtaccgtcgccggaacccgagaatcaaaaacgc
acaaaatcagaaacagaatcaccagcagatgcagagcttacctttgctgaccttggattg
gaccctcgcctcgtccaggccgtcgccgaacagaagtttctcaagccaacactcgtccaa
cgcaaagccattcctcttgcattgaacgggaaagatgtcctttgcaagtccaagactggc
tctggaaagactgctgcgtacattctccctgtgctgtctgctatcctgaagaaaaagagc
aacgagtctgtcgccgctacgaccgctttaatattggtaccgactcgagagcttgcagac
caagtcttcaaagtcattgagcaattctccacgttctgtgccaaggatgtccgcgccgtg
aaactgacggacaagctctctgatgccgtacaacgatctctgctgtctacgaaccctgat
atcgtcatatctacccccgcacgagcatggtataatgtgaaatcgaaccagtccgcactt
tctcttgacaaactcacccacctcgtactggatgaagccgatctgctgctgtcgtatgga
tatgacgaagatttggagaacctgtcctggtccattccgaaggggatacagacgaccatg
atgagtgctactttaacggcagaagtggattcactaaagaagatattctaccgcgataac
gctccgactctgctggacctagaggaaccagatgaggaaggcgagggagtgacgcagctg
gttacaaagtgtgccgaggatgagaagttcctcttggcttatatcatttttaagctgcaa
ctagtcaagggaaaatgcatcatcttcgttggcgacgtcgaccgatgttaccgattgaag
ctgttctttgagcaatttggcattcgaagctgtattttgaactcggaattacccgtaaac
tctagaattcacgtcgtcgaagagtttaatcgcaatgtgtacgacatcattattgcttcg
gatgagaaggaggttctcggaaatgaagagaaggccgacgaggaagaaaataacgaaggt
gcagagaatgcggattctgatgcagagaaagaggagcaacggccgaagaagaagcgcaaa
ggatcgaagcgagacaaggaatacggtgtttctcgaggtattgacttcaagaacgttgct
gctgtcattaatttcgatctccccacatctgcttcgtcgtacacacaccgcattggacgt
acggcacgtgccggtaaggctggcatggcattatcgttcgttattcccaaggaacaattc
cggaagcacatgcctacaacaattcaaagcgccgagaatgacgagaaggtgctggcaaga
attaccaggcaacaagctaagaagggcaaggaaatcaagccgtacaacttcaacaccaag
caagtggaggctttccgatatcgtatgaatgatgcccttcgcgctgtcaccaaggtggct
gtccgtgaggcgcggacacgggaactacgacaagaactactaaagagcgaaaagctcaag
aggtattttgaagagaacccatcggaaatcaaccaccttcgacatgatggtgaactgaga
acggcgagacaacaggctcatttgaagcatattccagagtacttgttaccggagaatgga
aagaagggcctcacggagagtgacattggcttcgttccgctgaggaagcctggcaagctg
cgtgggcagaggaaaggaaagggcacaaaacgaggcggtttccgtgttggaggccgaaaa
ggtgatcctctcaaaacgtttaaagcaaggagaagggcgaaatag
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