KEGG   Pochonia chlamydosporia: VFPPC_01215
Entry
VFPPC_01215       CDS       T09407                                 
Name
(RefSeq) cell cycle control protein
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03040  Spliceosome
pchm04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VFPPC_01215
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    VFPPC_01215
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchm03041]
    VFPPC_01215
   04121 Ubiquitin system [BR:pchm04121]
    VFPPC_01215
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_01215
Enzymes [BR:pchm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     VFPPC_01215
Spliceosome [BR:pchm03041]
 Complex B
  Other components
   Prp19 complex
    VFPPC_01215
 Complex C
   Prp19-CDC5 complex
    VFPPC_01215
Ubiquitin system [BR:pchm04121]
 Ubiquitin ligases (E3)
  U-box type E3
   VFPPC_01215
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    VFPPC_01215
SSDB
Motif
Pfam: WD40_Prp19 Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40 WDR55 ANAPC4_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd EIF3I Beta-prop_HPS5 Beta-prop_EML B-prop_COPA_B_2nd Beta-prop_WDR35_TULP_N Beta-prop_CAF1B_HIR1 V_ATPase_I_N VID27 Beta-prop_SCAP HTH_SUN2
Other DBs
NCBI-GeneID: 28845074
NCBI-ProteinID: XP_018149605
UniProt: A0A179G6V4
LinkDB
Position
1:4709001..4710674
AA seq 486 aa
MLCGSKRSCFPGKLPKSLSCPRSQVRVVYEKRLIEQYINEHATEPGTGEALTTDDLLPLQ
SSRVVRPRPPTLTSIPALLATFQNEWDNLALETYNLKEQLVRTREELATALYQHDAAVRV
IARLTKERDEARDSLSKVTVTDGAANGEEMVVDSVETLPEPLAGTNVIFSSLSKGRKRRP
VPEGWVTADEVSSFDTTASSALPVSQATSIDLEGGYAALGGLKGEAAVYSIEADKLERQL
PVNEAVTNTLWTGEKLFFATSQGNVKVYEAGNEVAAASEHAGPVTGLSIHPGAEILGSVG
TDKSIVFYDVATMKRASRAFADRLTTTALTTCAFHPDGHIFAAGTLSGDVKLYMTKNLEQ
AAVFRLGAPVQAVAFSENGFWLAATAKGQTTVTIFDLRRTEGDAAPAKVLETGGSVQSLA
WDYTGQYLATGGASGVTIQQYAKSSKKWSEPFRNSTPVVGLRWGESARKLVAVNGEGVVS
VFGVKE
NT seq 1461 nt   +upstreamnt  +downstreamnt
atgctttgcggaagtaagaggagttgctttccggggaagctccccaagagcctgtcgtgt
ccaagaagtcaggtaagggttgtttacgagaaaagacttatcgagcagtacatcaacgag
cacgccaccgaaccgggcactggcgaggctcttaccaccgatgaccttctcccccttcag
tcctcgcgcgtcgtccgccctcgccctcccacactaacatccatacctgcgcttttggcg
acctttcaaaacgagtgggacaatcttgccctagaaacgtataatctaaaagaacaactc
gtacgaacgagggaagaactggctaccgcactataccaacatgatgctgccgttcgcgtc
attgcgcgtttgacaaaggagagagacgaggccagggactcactcagcaaagtcacagtt
actgacggtgcagctaatggcgaagaaatggttgtggatagtgttgaaacactacccgaa
cctttggctggtactaatgttatcttttctagcttatcgaaaggtcgcaaaagacggcct
gttcctgaaggctgggttacggcagacgaagtatcctcgtttgacaccacagcctctagc
gctttacctgtctcgcaggcaacttcgatcgatcttgagggaggatatgccgcccttggg
ggtctgaaaggcgaggccgctgtttactctatcgaagccgacaagttggagaggcagttg
ccggtcaacgaggccgtcaccaacacgctgtggactggagagaagctgttctttgccaca
agccaaggcaacgtgaaagtgtacgaagcgggcaatgaggttgccgcagcctcggagcat
gctggtcctgtaactgggctcagtattcaccctggagccgaaattcttggctccgtgggt
acagacaagagcattgtgttctacgacgtggctactatgaagcgagctagccgggccttt
gctgatcgactgacaaccacagcactcactacatgcgctttccaccccgatggacacatc
ttcgcggcaggaacattgagtggggatgtcaaactttatatgaccaagaatctggaacaa
gctgccgtgttcaggcttggtgcacctgttcaagccgttgcgttctccgaaaatggattt
tggctggctgctacagccaagggtcagacaacagtcacaatctttgatctccgtcgcacg
gaaggcgatgcagcacctgccaaggttctggagactggtggatccgtgcagtctttggct
tgggactatactggccagtacctggcaactggaggtgcgtctggcgtgactattcaacag
tacgccaagtcgagcaagaagtggagtgaaccatttagaaactcgacgcctgttgttggt
ctcagatggggagagtcggcaagaaagcttgtggcagttaatggtgagggtgtggtgagt
gtatttggcgtcaaagaatag

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