Pochonia chlamydosporia: VFPPC_01367
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Entry
VFPPC_01367 CDS
T09407
Name
(RefSeq) DNA repair protein Rad4
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_01367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_01367
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
VFPPC_01367
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
28845201
NCBI-ProteinID:
XP_018149799
UniProt:
A0A179G7E3
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Position
1:5195936..5198430
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AA seq
812 aa
AA seq
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MVGRKRAVSSRSSRRGTGSGQDAEPNIYQQMLSEAGVSAPDERSPERPLKRRRPGSQRQV
NPSSDGPSTQSQLKTQLDTPPSDDDEDEDIEFQDVVLPAPTVQTMELESDDEDDEDEDIQ
FEDVDFSAPLPDAPAEKPSNLELNLTAHQSSASPSKRPGERRKPISKEERERRVDIHRAH
LLCLLSHVARRNHWCNDARVQDSLRPHLTDKTVNYLTPGSHLPQFGQAESLKNGLRQAAD
VWKTKFEITERGLRRALWAEDAEQLQHYEPADDLDSCLDRDDFREAAKKLQGSRDVGAQL
YCSLLRSVGVRARLVCSLQPLSFVSGAPTLPKPKGPKQTPKTTQNERTKEALAKYEALAA
STGAATGSAGGSSARRRLGHPNATAYNFQPRPAAPKAKRAFDGPIRVRESSYPVYWVEVL
DTGHQKWQPADPVVTNTFWKPKVFEPPITDKENCLSYVVAFEADGTAKDVTRRYAKAYTA
KTRRLRVETPLDDGGQWWRSALKPFRRRRPTDLDQIEDNELTGVEAREPMPRNVQDFKDH
PVYALERHMRRHEVLVPDAKPSGTVGAGSRGPLEKIYRRRDVRIARSAEKWYRMGREVKP
NEIPAKWLQRQARPKGSRFDDRDEADMEDDAGTPIYTTEQTELYEPPPVRNGRVPKNKFG
NIDAYVPGMIPRGAVHIVHEYAARAAFIVGVDYAPALTGFQFKGRHGTAVLSGIVVAKEF
EAAIRSVIDGLSDVEQEMEDERKRLAALRMWRRLLMGLRIRERIWSGVGEEERKEADREA
EMEAELANAESDVTDEFDMVVDEDEGGGFLIE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggttgggagaaagcgcgctgtttcttcgaggagctccagaaggggaacgggcagtggg
caagatgcagaaccgaatatttaccagcagatgctgtcagaagctggggtctctgcgccg
gacgaaaggtcaccagaacgcccactgaaacggaggcgaccaggttcacagcgacaggta
aacccttcttcagatgggccaagcactcaaagtcaactaaagacgcaattggacacgcca
ccaagcgatgacgacgaagacgaggatatcgaattccaggatgtcgttctaccagcgcca
actgtgcagaccatggagctcgagtctgatgatgaggatgacgaagatgaagacattcag
tttgaggatgtcgatttctctgcgccgttgccagatgcacctgctgaaaaaccaagcaac
ttagaactgaatttgacggcccaccagtcttccgcatccccatccaaaagaccgggcgag
cgacgcaaaccgatctctaaggaggaaagggagcgccgcgtcgatattcatagagctcat
ctgttgtgtcttttgtcgcatgtggcgcgcagaaaccactggtgtaacgatgcaagagtg
caagattccctgcgtccgcacttgactgacaagacggtcaactatctcactcctggatct
cacctaccacagtttggacaggctgagagcttgaaaaatggcctcagacaggcagctgat
gtgtggaagaccaaatttgagattacggagcggggactacgaagggctctctgggcagag
gatgcggaacagttgcaacattatgagcctgcagatgatttagattcgtgtctagatcga
gatgatttccgagaagccgcaaagaagctgcagggatcaagagacgttggagcacaactg
tattgctccttgttacgaagtgtgggtgtgcgagccagactggtgtgttctttgcaaccg
ctgtcctttgtatctggcgctccaacgttaccgaagccgaagggaccgaaacagacacca
aaaacaacacagaatgaacgtaccaaagaagccttggcgaaatacgaggccctcgctgcg
agcactggtgcggcgacgggttctgcaggtggctcaagtgcacgtcgcagattggggcat
ccgaatgctacagcttataattttcaacctagacccgctgctccgaaagcaaaaagggcg
ttcgacggacctatacgggttcgcgaatcttcttatccagtctactgggtggaggtgttg
gatactgggcaccagaaatggcaacctgctgaccctgtagtgacgaacacgttctggaaa
ccaaaggtattcgagccacccattaccgacaaggagaactgtctctcgtatgtagtagca
tttgaggccgatgggacagcaaaggatgttacgaggagatatgcaaaggcgtacacagcc
aaaactcgccgtctgagggtcgaaacacctcttgacgacggagggcaatggtggcggagt
gcgttgaagccgtttcgcaggcgccgtccgacagacttggaccaaattgaagataatgag
ttgacgggcgtggaagcccgagaacctatgccgagaaatgtacaggattttaaggatcat
cctgtatatgcattggagagacacatgagacggcacgaagttctcgtgccggatgcaaaa
ccatcagggactgtaggcgctggaagtcgaggtccactggagaagatatacaggcggaga
gatgtccgcatagcacgaagcgcagagaagtggtatcgcatgggtcgagaggtgaagccc
aacgagatcccagcgaaatggctacagaggcaagctcgccccaagggatcgaggtttgac
gacagggacgaagcagacatggaagacgatgccggcacacctatatacactacggaacaa
acagagctctacgagccaccgccggtccgcaacggacgcgtaccaaagaacaaattcggc
aacattgacgcctacgtgcccggcatgataccaaggggagcagtgcacattgttcacgag
tatgctgcccgggcagcgttcatagtaggcgtcgactacgcaccagctctgacggggttt
cagtttaaaggacgacacggcacagctgtcctcagcggaatagtagtcgccaaggaattc
gaagcagctattcggtctgtgatagatggactatcagacgtagagcaagagatggaagat
gaacgcaagagactagccgcgttgaggatgtggcgaaggctactcatggggctgcgtatc
cgggagaggatatggagcggtgtcggcgaggaggagaggaaagaggcggatagggaggcg
gagatggaggctgagctggcgaatgcggagagtgatgtgacggatgagtttgatatggtt
gttgatgaggacgagggcggtgggtttctgattgagtga
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