KEGG   Pochonia chlamydosporia: VFPPC_01367
Entry
VFPPC_01367       CDS       T09407                                 
Name
(RefSeq) DNA repair protein Rad4
  KO
K10838  xeroderma pigmentosum group C-complementing protein
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPPC_01367
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_01367
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      VFPPC_01367
SSDB
Motif
Pfam: Rad4 BHD_3 BHD_1 BHD_2 Transglut_core
Other DBs
NCBI-GeneID: 28845201
NCBI-ProteinID: XP_018149799
UniProt: A0A179G7E3
LinkDB
Position
1:5195936..5198430
AA seq 812 aa
MVGRKRAVSSRSSRRGTGSGQDAEPNIYQQMLSEAGVSAPDERSPERPLKRRRPGSQRQV
NPSSDGPSTQSQLKTQLDTPPSDDDEDEDIEFQDVVLPAPTVQTMELESDDEDDEDEDIQ
FEDVDFSAPLPDAPAEKPSNLELNLTAHQSSASPSKRPGERRKPISKEERERRVDIHRAH
LLCLLSHVARRNHWCNDARVQDSLRPHLTDKTVNYLTPGSHLPQFGQAESLKNGLRQAAD
VWKTKFEITERGLRRALWAEDAEQLQHYEPADDLDSCLDRDDFREAAKKLQGSRDVGAQL
YCSLLRSVGVRARLVCSLQPLSFVSGAPTLPKPKGPKQTPKTTQNERTKEALAKYEALAA
STGAATGSAGGSSARRRLGHPNATAYNFQPRPAAPKAKRAFDGPIRVRESSYPVYWVEVL
DTGHQKWQPADPVVTNTFWKPKVFEPPITDKENCLSYVVAFEADGTAKDVTRRYAKAYTA
KTRRLRVETPLDDGGQWWRSALKPFRRRRPTDLDQIEDNELTGVEAREPMPRNVQDFKDH
PVYALERHMRRHEVLVPDAKPSGTVGAGSRGPLEKIYRRRDVRIARSAEKWYRMGREVKP
NEIPAKWLQRQARPKGSRFDDRDEADMEDDAGTPIYTTEQTELYEPPPVRNGRVPKNKFG
NIDAYVPGMIPRGAVHIVHEYAARAAFIVGVDYAPALTGFQFKGRHGTAVLSGIVVAKEF
EAAIRSVIDGLSDVEQEMEDERKRLAALRMWRRLLMGLRIRERIWSGVGEEERKEADREA
EMEAELANAESDVTDEFDMVVDEDEGGGFLIE
NT seq 2439 nt   +upstreamnt  +downstreamnt
atggttgggagaaagcgcgctgtttcttcgaggagctccagaaggggaacgggcagtggg
caagatgcagaaccgaatatttaccagcagatgctgtcagaagctggggtctctgcgccg
gacgaaaggtcaccagaacgcccactgaaacggaggcgaccaggttcacagcgacaggta
aacccttcttcagatgggccaagcactcaaagtcaactaaagacgcaattggacacgcca
ccaagcgatgacgacgaagacgaggatatcgaattccaggatgtcgttctaccagcgcca
actgtgcagaccatggagctcgagtctgatgatgaggatgacgaagatgaagacattcag
tttgaggatgtcgatttctctgcgccgttgccagatgcacctgctgaaaaaccaagcaac
ttagaactgaatttgacggcccaccagtcttccgcatccccatccaaaagaccgggcgag
cgacgcaaaccgatctctaaggaggaaagggagcgccgcgtcgatattcatagagctcat
ctgttgtgtcttttgtcgcatgtggcgcgcagaaaccactggtgtaacgatgcaagagtg
caagattccctgcgtccgcacttgactgacaagacggtcaactatctcactcctggatct
cacctaccacagtttggacaggctgagagcttgaaaaatggcctcagacaggcagctgat
gtgtggaagaccaaatttgagattacggagcggggactacgaagggctctctgggcagag
gatgcggaacagttgcaacattatgagcctgcagatgatttagattcgtgtctagatcga
gatgatttccgagaagccgcaaagaagctgcagggatcaagagacgttggagcacaactg
tattgctccttgttacgaagtgtgggtgtgcgagccagactggtgtgttctttgcaaccg
ctgtcctttgtatctggcgctccaacgttaccgaagccgaagggaccgaaacagacacca
aaaacaacacagaatgaacgtaccaaagaagccttggcgaaatacgaggccctcgctgcg
agcactggtgcggcgacgggttctgcaggtggctcaagtgcacgtcgcagattggggcat
ccgaatgctacagcttataattttcaacctagacccgctgctccgaaagcaaaaagggcg
ttcgacggacctatacgggttcgcgaatcttcttatccagtctactgggtggaggtgttg
gatactgggcaccagaaatggcaacctgctgaccctgtagtgacgaacacgttctggaaa
ccaaaggtattcgagccacccattaccgacaaggagaactgtctctcgtatgtagtagca
tttgaggccgatgggacagcaaaggatgttacgaggagatatgcaaaggcgtacacagcc
aaaactcgccgtctgagggtcgaaacacctcttgacgacggagggcaatggtggcggagt
gcgttgaagccgtttcgcaggcgccgtccgacagacttggaccaaattgaagataatgag
ttgacgggcgtggaagcccgagaacctatgccgagaaatgtacaggattttaaggatcat
cctgtatatgcattggagagacacatgagacggcacgaagttctcgtgccggatgcaaaa
ccatcagggactgtaggcgctggaagtcgaggtccactggagaagatatacaggcggaga
gatgtccgcatagcacgaagcgcagagaagtggtatcgcatgggtcgagaggtgaagccc
aacgagatcccagcgaaatggctacagaggcaagctcgccccaagggatcgaggtttgac
gacagggacgaagcagacatggaagacgatgccggcacacctatatacactacggaacaa
acagagctctacgagccaccgccggtccgcaacggacgcgtaccaaagaacaaattcggc
aacattgacgcctacgtgcccggcatgataccaaggggagcagtgcacattgttcacgag
tatgctgcccgggcagcgttcatagtaggcgtcgactacgcaccagctctgacggggttt
cagtttaaaggacgacacggcacagctgtcctcagcggaatagtagtcgccaaggaattc
gaagcagctattcggtctgtgatagatggactatcagacgtagagcaagagatggaagat
gaacgcaagagactagccgcgttgaggatgtggcgaaggctactcatggggctgcgtatc
cgggagaggatatggagcggtgtcggcgaggaggagaggaaagaggcggatagggaggcg
gagatggaggctgagctggcgaatgcggagagtgatgtgacggatgagtttgatatggtt
gttgatgaggacgagggcggtgggtttctgattgagtga

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