Pochonia chlamydosporia: VFPPC_01368
Help
Entry
VFPPC_01368 CDS
T09407
Name
(RefSeq) ABC transporter
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VFPPC_01368
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pchm02000
]
VFPPC_01368
Transporters [BR:
pchm02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
VFPPC_01368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
SMC_N
AAA_29
AAA_23
RsgA_GTPase
DUF4162
AAA_27
AAA_16
MeaB
Motif
Other DBs
NCBI-GeneID:
28845202
NCBI-ProteinID:
XP_018149800
UniProt:
A0A179G7E4
LinkDB
All DBs
Position
1:5201226..5206118
Genome browser
AA seq
1630 aa
AA seq
DB search
MALRKQIWTLMSKNFRAVLLRHMKTCIIMAFLLPIVLSSFFSFAKNLFVPPANYGIGKLR
PIMTLPEAFQAAHSGGRTKVVLVNNGFSGGDIDRVLGKIANAVTTDGSMDLVRVGHEDEL
VTTCRSSLRGVTGCFCAIVMRSSPTEGPGGLWNYTIRTDAAFWSEPVKFNVDKSDNVEQV
YLLPMQKAVDTAIASLNGSNSDPLAKTDGQPFASMTQKERDRKVRQLYHKSIVNFMAVAF
IANILWITYHLTGFVAAERESGMSQLLDAMMPVSKPWKAQAARIIAHHLSFCIIYAPAWI
IGSIIIRFGVFVNTSIIIVLFFNLFSGLALASMSILIASFFKKAQLSGITATIGILLLGI
LAQALTQPTIGPVAVLSILFAPCNYVYFLTFMAKFEKWDLAANLFKNPPASSWEMPGIVF
FIIVIAQIIIYPLLGALVEKNLYGTTTEGRKIQLQHGDDGPLAENAVVLDKLTKIYYPSF
FSRLFSSKSKPREPVVAVKELSFQAGRGQIVALLGANGSGKSTTLDAIAGLHKLTSGSIT
IDGKGGLGIAPQKNVLWDDLTVAEHLAIFNRLKAPDAPASKAEIMNLIKSIDLYPKRNAL
AKTLSGGQKRKLQLGMMLTGGSAVCCVDEVSSGLDPLSRRKIWDILLAERGQRTLILTTH
FLDEADLLADHIAILSKGTLRAEGSSVELKDRFGSGYRVHLQKNPDALHLPSIPGVQKKE
SFDMVTYVAPTSNLAARVIKILEENGFTQYRFSGPTIEDVFLQLAEEIKDEEAFKGISPG
VPGESDSGNEKDQPSSSSKEGSTHQGLKLLDGKRVGYFKQAMILYRKRVTVLKRNWILYL
IAFILPIFAAGLTVLYVKGRSQTGCSPKDQASSYGTEDAFTQAKNTDKIVFLAGPSSKLS
IASVTSLLQPILNGSRSGATVGSAALQNLKLVDTFDSWQQHIRNDFRNITTAIWLGDGNS
EPAVGWVANLFITSSITAQQVLDIFLTNTPIATTWSSFDVPFNSGIGDALSLVIYMGLAL
ACYPAFFALYPSNERRRFVRALQYSNGVRPFPLWIAYLLFDFTIVVLTSAVVTAIWASLS
SVWFHIEYVFVVFFLYGLASILYSYVISLFTKSQLATFAWSAATQAVFFLGYLIAYICVV
TYVPVHRIDSSLLICHFVISAFSPIANASRAMFLATNLFATACEGNELSTTPAGLEEYGG
PILYLAIQCFVLFGLLLWFDSGSVGSSVRGLLGRSQPTESTDELDEEVAQELTRVTSTGQ
AEDGLRVVHLTKSFKKNTAVDNVTFGIKRGEVFALLGPNGAGKSTTISLIRGDIKPSRNG
GDIFVEDVSVSKNLAAARTHLGVCPQIDALDQMTVREHLEFYARIRGIPDIQHNVSAVLQ
AVGLEAFASRMGYALSGGNKRKLSLGIALMGNPTVVLLDEPSSGLDAASKRIMWKTLAAT
VHGRSILLTTHSMEEADALAGRAGILSRRMLALGTPDNLRHRFGDALHVHLVSTTAPRTT
DQEMQRVISWIQNRLPSANVDTQTYHGQLRFSVSASDVLALQKQPSSNVDIASHDNDMAH
AAREGSVIGQLVVLLEESKQTLGISHYSVSPTTLDQVFLTIVGQHNVKEENYEEKKSKWS
KMVHFGSSKK
NT seq
4893 nt
NT seq
+upstream
nt +downstream
nt
atggccctcagaaagcagatatggacattgatgtccaagaacttcagggccgtcttgctt
cgccacatgaagacgtgcatcatcatggcctttcttcttcctatagtcctttcatccttc
ttcagctttgccaagaatctcttcgtcccgcctgccaactatggcattggcaaacttcgc
ccaatcatgaccctcccagaggctttccaagccgctcacagtggtgggagaacaaaggtc
gtcctcgtcaacaacggcttctccggaggcgacattgaccgtgtcctgggaaagattgcc
aacgctgtaacgactgatggatccatggaccttgtcagggttggtcatgaggacgaattg
gtgacgacctgccgtagcagcttgcgaggcgtcactggctgtttctgcgccattgtcatg
cgttcgtcgcccacagaaggacctggcggactctggaactacaccattcgtactgatgct
gccttttggagcgaaccagtcaagttcaatgtcgacaaatcggacaatgttgagcaggtg
tatttgctgcccatgcaaaaggccgtcgataccgccattgcatctctcaacggctccaac
tcggaccctttggccaagacagacgggcagccatttgccagcatgacacagaaagagcga
gatagaaaagtccgacaactttatcacaaatccattgtcaacttcatggctgttgccttc
atcgccaacatcttgtggatcacataccatctcacgggatttgttgccgccgaacgtgag
agtggcatgtcgcagcttcttgatgcaatgatgccggtgagcaagccgtggaaggcgcag
gctgctcgcatcattgcacatcacttatccttttgcataatttatgctccggcatggatc
atcggctccatcatcatccgattcggtgttttcgtcaacactagcatcatcatcgttctc
tttttcaacttgttctccggactggcccttgcgtccatgtctatcctcattgcttcattc
ttcaaaaaggctcaactaagtggtatcactgccaccattggcatcctcctcctcggtatt
ctcgcccaggcactcacgcaaccaacaattggtcccgtggccgtcctatctatattgttc
gccccgtgcaactatgtgtatttccttaccttcatggccaagttcgagaagtgggacttg
gcggcaaacctcttcaagaaccctccagccagctcttgggagatgccgggtatcgtcttt
ttcatcatcgtcatcgctcaaatcatcatttaccctctactgggcgctctagttgaaaag
aacctctacggcacaaccaccgaggggcgcaagattcagcttcaacatggcgacgacggc
cccttggcagagaatgctgtagtgttggacaaactcaccaagatttattaccctagcttc
ttctcacgcttgttctcttcaaagtcgaagcctcgtgagcctgttgtagccgtcaaggag
ctcagcttccaggcaggacgcggtcaaatcgtcgctctgttgggcgcaaatggtagtgga
aagagtacaactttggatgctattgctggtctccacaaactgaccagtggttcaatcact
attgacggcaagggtggtcttggtattgcgccgcagaaaaatgtcctatgggatgacttg
acggttgcagagcatctcgccatcttcaacaggttaaaggctcctgatgctccggcgtcc
aaggcggaaattatgaacctcatcaagtcaatcgatttgtatcccaaacgcaatgctcta
gccaagactctttccggtggccaaaaacgaaagttgcagcttggtatgatgttgacgggt
gggagcgcagtttgctgtgtcgatgaagtgagtagtgggctagatccgttgtctcgaagg
aaaatatgggatatacttctcgcagaacgggggcaacgaacattgattcttaccacccat
ttcttggatgaagccgatctgcttgctgaccacattgccattctgtccaaggggactctt
cgcgctgaaggttcatcagtggaactcaaggacagatttggcagcggatatcgtgttcat
ctacagaagaaccccgacgcattgcacttgcctagtatcccgggggttcaaaagaaagaa
tctttcgacatggttacgtatgttgcgccgacgtcgaatctggcagcccgagtcatcaag
attctggaggagaacggcttcactcagtaccgcttctccggtccgacaatcgaagacgtg
ttccttcagcttgctgaagaaattaaagacgaagaagctttcaagggaatttctccaggt
gtcccaggagaatcagacagcggaaatgagaaggaccagccttctagttcctcgaaggag
ggctcaacacaccaggggctgaagcttctcgacggaaaacgtgtaggctacttcaagcaa
gccatgattctctaccggaaacgtgttactgttcttaagcgcaattggatcctctatctc
atcgcgttcatcttgccgatttttgcggctgggctcacagtactctacgttaaaggcaga
agtcagaccggctgttcgccaaaggaccaggcttcctcctacggcactgaggacgctttc
acgcaagcaaaaaataccgacaagattgtgtttctagccggaccatcttccaagctctca
attgcaagtgtcacgagcttgctacagccgatactcaatggctcgaggagcggtgctacc
gtgggctctgcagccctgcaaaacctcaaacttgttgatacttttgactcttggcagcag
catatcagaaacgatttccgaaacatcaccacagcgatatggctaggagatggcaactca
gaaccagccgttggctgggttgccaacttgttcattaccagctctattacggcgcagcag
gtcctcgacatctttctgaccaacacccctattgccacaacctggtcgtcatttgacgta
cctttcaactctggtattggcgatgccctgagtcttgtaatttacatgggcctcgctctg
gcctgctatcccgccttctttgccctctacccgagcaatgagagacgacggttcgtacgt
gctctgcagtactctaacggtgttcgaccattccccctatggatagcctatctcttgttc
gactttaccatcgtcgtcctcacttcagccgtcgtgaccgcaatttgggccagcttatcc
agcgtctggtttcacatagagtacgtttttgttgtcttctttctgtatggactggcatca
atcttgtattcctacgtcatttcgctattcacaaagtcccagctagctacattcgcctgg
tcagcggccacacaagccgtcttcttcctcggctatctgattgcgtatatctgcgtagtc
acctacgtcccagttcatcgcatcgactcgtcgctgctcatatgccactttgtcatctcg
gccttttcgccgattgcaaacgcaagcagggccatgtttctggcgacaaatctcttcgca
acagcttgtgaaggcaacgagttatcaacgacacctgccggccttgaggaatacggcggg
ccaatcctctacttggctatacaatgttttgttcttttcggtctgttactctggtttgac
agcggcagtgtcggttcctctgtccgcggactcctcggccgtagtcaaccaaccgagtcc
accgacgaactggacgaagaagtggcccaggaactaacccgagtaaccagcacgggtcaa
gcagaagatggtctccgcgtagtacacctaacaaagtcgttcaaaaagaacaccgcagtc
gacaacgtcacctttggcatcaagcgcggcgaagtatttgcactccttggacccaacggc
gctggaaagtccaccaccatctcgctcattcgaggtgacatcaagcccagccgcaacggc
ggcgacatctttgtcgaggacgtatccgtctccaagaacctcgccgccgcccgtacacac
ctcggcgtatgtccccagatcgacgctctcgaccaaatgaccgtacgggagcatctcgaa
ttctacgcccgaatccgcggcatcccggacatccagcacaacgtctctgccgtcctccag
gccgtaggtttagaagcattcgcttcccgcatgggttacgccctctcgggtggcaacaag
cgcaagctcagtctcggaatcgcccttatgggcaatcccaccgtggttcttctcgatgaa
ccctcctccggcttggacgctgcctccaagcgcatcatgtggaagacactcgcggctacc
gtccacggccgctccatcctactcaccacgcatagcatggaagaagcagacgccctcgcc
gggcgtgctggcatcctctcgcgccgtatgctcgccctcggaacgccagataacctgcgg
catcgcttcggcgacgctctccatgtgcatctcgtctctactacagcgccccgaactacc
gaccaagaaatgcaacgcgtcatctcttggatccagaaccgcttgccgtctgctaatgtc
gatacacagacttaccatggacagctgcgcttctccgtgtctgccagcgacgtcctcgct
cttcagaagcagcccagcagtaatgttgatatcgcatcacacgacaacgacatggcccac
gctgctcgagaaggaagcgtcatcggtcagctcgtcgtgcttctggaggaaagcaagcag
acactgggtattagtcactacagcgtcagtcccacgaccctcgatcaagtcttcttaact
atcgtcggacagcataatgttaaggaggagaattacgaggaaaagaagagcaaatggtcg
aagatggtgcattttggcagttccaaaaagtaa
DBGET
integrated database retrieval system