Pochonia chlamydosporia: VFPPC_01376
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Entry
VFPPC_01376 CDS
T09407
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit
KO
K03267
peptide chain release factor subunit 3
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VFPPC_01376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_01376
03012 Translation factors [BR:
pchm03012
]
VFPPC_01376
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
VFPPC_01376
Translation factors [BR:
pchm03012
]
Eukaryotic type
Release factors
VFPPC_01376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
28845209
NCBI-ProteinID:
XP_018149812
UniProt:
A0A179G991
LinkDB
All DBs
Position
1:<5248427..>5250710
Genome browser
AA seq
716 aa
AA seq
DB search
MSNLNSWEDDPSAQDENLSRRAQQQLNVNAGQGQGQQGGFRPGASSFQPGAQSFQPGQAY
GGGFANQYQQQQYYQQGYYPQYGQQQQQQQGFNQYNQQGGYGGGFSQSYNQGYAGGYPQY
GQQQGQGQQQQPAQTAAPSAPAAAAAAAAAPAAPKVLTKEGGTKVLSIGGDTSAPKPKAK
VLSIGGTSTPNKDKEEAKREPSNKPEAGQKATAAKAIEKTGEKAGKAASSGKSSGRTSPT
PSSGRSSPSGPGEKKAQREADAVSKEQAADVDDETLKEVYGKEHVNIIFIGHVDAGKSTL
GGSILWTTGMVDERTMDKYKREAKDLGRESWYLSWVMDLTKEERSKGKTVEVGRGFFETE
KRRYSILDAPGHKTYVPNMIGGASQADVGILVISARKGEYETGFERGGQTREHAMLAKTQ
GVNKLIVVINKMDDATVEWSKERYTECTTKLSQFLKGTGYNLKTDVFFMPVAAQSSLNIK
DRLPKDIAPWWEGPSLLEYLDGMNALERKINAPFMMPVNAKYRDMGTMVDGKIEAGVVKK
GMTLVMMPRKQNVEVSALYGEQEDEVSILQCGDQVRMRLKGVEEEDILPGFVLCSPKRLV
HCVAEFEAQIRILDLKSILTSGFNCVLHVHSAIEEVTFAALLHKLQKGTNRKSKNPPTHA
KRGDSIIARMQVIGGAGSVCVEKFDDYPQMGRFTLRDQGQTIAIGKITKLITEGSE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatctcaactcgtgggaagacgatccttctgctcaggacgagaatctttctcgg
agagcgcagcagcaactcaatgtgaacgctgggcagggccagggccaacaaggaggattc
cgccctggtgcctcctccttccagcctggtgcccagtcattccagcccggtcaagcatac
ggtggtggttttgccaaccagtatcagcagcagcaatactaccagcagggctattatcct
cagtacggtcagcagcaacagcaacagcaaggattcaaccagtacaatcagcaaggagga
tatggcggtggcttcagccagagttataatcagggatatgctggcggttatccccagtac
ggccaacagcaaggtcagggccagcagcagcaacctgcgcagacagctgccccttctgct
cccgcagccgcagccgcagccgcagccgcaccagctgcccccaaggttctaaccaaggag
ggtggaaccaaggttctcagcattggtggcgatacttcggctcccaagcctaaggctaag
gtgctttcgattggaggaacatcgacgccaaataaagacaaggaagaggcgaaacgcgag
ccatcgaacaagccagaggcaggacagaaagccactgccgccaaagccatcgagaagact
ggcgagaaggccgggaaggccgcctcatcaggcaagtcttctggcaggacgtcaccaact
ccatcgtctgggaggtcgagcccttctggtcctggggagaagaaagcccagcgcgaagcc
gacgctgtcagcaaggaacaagccgccgatgttgatgacgaaactctgaaggaagtctac
ggaaaggaacatgtcaacattattttcattggtcacgtcgacgccggcaagtctacactg
ggcggttctattctctggaccaccggcatggttgatgagagaacgatggacaaatacaag
agagaagcaaaggatctcggccgagagtcttggtatctgtcatgggtcatggacttgacc
aaggaagagcgatccaagggcaagactgtcgaagttggtcgaggtttcttcgaaaccgaa
aagcgaagatacagtattctggacgcccctgggcataagacctatgtgcccaacatgatt
ggaggagcctcgcaggctgacgttggtattttggtcatctccgcccgtaagggtgaatac
gagactggtttcgaacgtggaggacagacccgtgagcatgctatgcttgccaagacacag
ggtgtgaacaagttgattgtcgtcatcaacaaaatggatgacgctacggtcgagtggtct
aaggagcgctatacggaatgcaccaccaagctctctcaattcctgaaaggcacaggctac
aacttgaagacggatgtctttttcatgcctgttgccgcgcaatcctccctgaatatcaag
gatcgcctgcccaaggacattgctccatggtgggagggcccatctctgctcgagtatctg
gacggcatgaatgctcttgaacgcaagattaacgcaccattcatgatgcccgtcaatgcc
aaataccgagatatgggcactatggttgatggcaagattgaggctggtgttgtcaagaag
ggcatgactctcgttatgatgcctcgcaagcagaatgtggaagtgtctgcgctttacggc
gagcaagaggatgaagtctcgattctgcagtgcggtgaccaagtgcgaatgcgtctcaag
ggcgtggaagaggaagacattttgcctggattcgtgctctgctcgccaaagagactcgtc
cactgtgtggctgagtttgaggcacagattcgtatcttggacttgaagagtatcttgact
tctgggttcaattgtgttttgcacgttcactctgccattgaagaagtcacttttgcggct
ttgttgcacaagctgcagaagggtaccaacagaaagagcaagaaccctcctacacatgcc
aagaggggagacagcatcattgcacgcatgcaagtgattggtggcgctggatctgtttgc
gtggagaagtttgatgattatccccagatgggccgtttcactcttcgtgaccagggccaa
acaattgccattggcaagatcactaagctgattaccgaaggctcagagtaa
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