Pochonia chlamydosporia: VFPPC_01394
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Entry
VFPPC_01394 CDS
T09407
Name
(RefSeq) autophagy protein Atg13
KO
K08331
autophagy-related protein 13
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04136
Autophagy - other
pchm04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
VFPPC_01394
04136 Autophagy - other
VFPPC_01394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_01394
03029 Mitochondrial biogenesis [BR:
pchm03029
]
VFPPC_01394
Membrane trafficking [BR:
pchm04131
]
Autophagy
Autophagosome formation proteins
ULK complex
VFPPC_01394
Atg1 complex
VFPPC_01394
Mitochondrial biogenesis [BR:
pchm03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
VFPPC_01394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
28845224
NCBI-ProteinID:
XP_018149832
UniProt:
A0A179G9B2
LinkDB
All DBs
Position
1:5319063..5322024
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AA seq
939 aa
AA seq
DB search
MHQQARQPPRLSVSPASSPQINQISQIRSNTTRDAAQNNRQRAGSNVSGRDPVSSPTVEN
HPTMGPPADSIKKLDQIVQNFFNKAAVLILESRMRVKPTRNANGQRKTNKWFQIETDELD
DFRDDLKIWKTCGSLEHHPPPLIIEVYLDTSSLKESQSLVILDDEGKRWDVMEQLNSSES
SSGSYHTAPTSRNAEVILERWRIDLKTTGTVPTEDFGPILPTIYKKAIVFFRSLFITTKL
LPAWKFASQGPAKSSHPALTPRCRIRTSEPGRLATDLLKQPIDGRRDPVTEYVFGDLDVP
VGRLSTAVTYRNDCSFRIDDAESLLSSRFMGVDENFFKPSVPQRTDRPHGQIAEVGSLRD
HRRGTALSDLHQTYGSLSTFHGDGPLGTSPLSALRSVKPPGSDTSSPPSSFPTNTGVEVA
PSSMPISSRVPAPRPVTSRPGESSSRRTSISFQPFKAGSLSGSPVPRHLEPESPSYAHSQ
TRPVSFPVSSQPRSRSSLTAGMPASLRGGPPSTSVETPTVGSPRPASTGRYSSSFTHRRG
RPSLGRAGDDEQNSSGRQSLASSVAQPGSGLLAETGGSSGSLHVEEDDISDFLKALDSRK
TLKSFEPAKRGESATNRTVAQLSKFHLMRDSNNALTESMTSSMQMQRSSSSSSRQLTSVP
GMVAPASMSASSSPGKPVSPHTPHTPAIPSRLSENSIIDYTATGRISSRGGRRQEPTVPE
PSRESTITQEGTTAIDIPLSPRLGSYQRRSSSAAQQTRAMVEDDDTDLAFAGAHRSISLG
ADDREPPTMSILLGRQMQMEEESAGGEGITSSLQPAAEIQPSDASTSDVMQRGSNDDNLP
DGLIPSSAQSGSPFPRRRYAGMGAASKATPPQSSRGSFTGSLSRLGRADDESVGEEPLVF
DLSEMDAQGRRSLEEGRGGGNASSERGAFEPRGTTRRGW
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagcaggcgagacagccgcccaggctgtccgtatcgccagcgtcatcgccgcag
atcaaccaaatcagccagatccgatccaacaccaccagagatgccgcacaaaacaaccgc
caacgagccggctccaatgtctctgggagagatcccgtgtcatccccgaccgtagaaaat
catcctaccatgggtcctccggcggattccatcaagaagctggatcagatcgtccagaac
ttcttcaacaaagccgccgttctgattctcgagtccagaatgagagtgaagcctacacgt
aatgcaaacggacagaggaagacgaataaatggtttcaaatagagacggacgaattagac
gacttcagagacgatctcaagatttggaaaacatgcggaagcttggaacatcacccacca
cctttaataattgaggtttatctggatacgtccagcctcaaagagagccaaagtcttgtc
attcttgatgacgaaggcaagcgttgggatgtaatggaacaactaaactcatccgaatcc
tcaagtggcagttatcacactgccccaacatcaagaaatgcagaagtcatactcgagcga
tggcgtatcgatctgaagacaaccggaactgttcccaccgaggactttggtccaatcctg
cccacaatctacaagaaggctattgtcttctttcgatctctgttcatcacaaccaagctc
ctgccagcttggaaattcgccagccaaggtccagcaaagtcttcgcatcctgccctcact
ccccgatgccgtattcgtacaagcgagccaggcaggttagctacggatttactgaagcag
ccaatcgatggtcgacgggaccctgttactgaatatgtgtttggggatcttgatgtaccc
gttgggcgacttagcacagccgtcacatatcgcaatgactgcagcttccgcattgacgat
gccgagtcattactaagttctcgctttatgggagttgatgagaatttcttcaaaccttca
gttccccagaggactgaccgaccgcatggtcagattgcagaagttgggtcactccgtgac
catcgtcgtggcactgcactgagcgaccttcaccaaacctatggcagcttgtcaacattc
cacggtgatggcccactgggaacaagccccctatcagcactgagatccgtcaaaccccct
ggctcagatactagctctccgccttcatctttcccaacaaacactggtgttgaagtcgcc
cctagttccatgcccatttcaagtcgagtgccagcacctcgtccggttaccagtcggccc
ggtgagagctcaagcaggcggacttcaatatcgttccaaccctttaaagctggatccctc
tccggatcaccggttccacgacatttggagcccgaatctccttcatatgcacactcacaa
acacgccctgtcagcttcccagtaagctcacaacctcgcagcagaagttcactgacggca
gggatgcccgcctcccttcgtggcgggccaccctccacgtctgttgaaacaccaacggtt
ggttcgcctcgtccagcgtccaccggccgttatagcagcagtttcacgcatcgacgaggg
cgtccgtccttgggccgagccggtgacgacgaacaaaatagtagcggacgacagagcctc
gcctcttcggtagcacaaccggggtcaggtttactggcggaaactggaggtagttctgga
tcattacacgtggaggaggatgatatctcggactttttgaaagctctggatagccgtaaa
actctcaagagctttgagccggccaaacgtggtgaatcggcgacgaatcgaacggtggcc
cagctgtccaagtttcacttgatgcgagactcgaataacgcactgacagagtccatgacc
tcgtcaatgcaaatgcaacggtcttccagctcctcaagccggcaactaacaagcgttcct
ggcatggttgccccggcttccatgtctgcctcctcttctcctggcaagcccgtgtccccc
cacacaccccatacgcccgcgattccatctcggttaagcgagaactcaataatcgactac
actgctaccggaagaatatcatctagaggtggccgccggcaagaacctacagtaccagaa
ccaagcagagaaagtaccattacgcaggagggtacaactgctattgatataccattgtcg
ccacgcctgggttcgtatcaaaggcgctcaagctccgcagctcaacagactcgggcaatg
gttgaggatgacgacacagacttggcatttgctggcgcgcatcgcagcatcagtcttgga
gctgacgacagagaaccccctaccatgagcatcttactgggccgacagatgcaaatggag
gaagagtcggcaggtggtgagggcatcacaagtagcctgcaaccggcagccgagattcag
ccgtcagatgcgtcgacatcggatgttatgcaacgtggctccaatgacgacaatctcccg
gatgggttgataccttcaagtgctcagtcggggtcaccattcccaagacgacgatatgcg
ggcatgggggcagcttccaaagcaacaccaccgcaatcatcacggggtagctttactgga
tcactcagccggttagggcgggcagatgatgagtcggttggcgaggagccgcttgtattc
gacctatcggaaatggacgcgcaaggcagacgtagcctggaagaaggacgtggaggaggc
aacgcaagcagtgaacggggagcatttgagccaaggggtacaacacgaagagggtggtaa
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