KEGG   Pochonia chlamydosporia: VFPPC_01438
Entry
VFPPC_01438       CDS       T09407                                 
Name
(RefSeq) RNA polymerase II, large subunit, CTD
  KO
K12842  U2-associated protein SR140
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    VFPPC_01438
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pchm03041]
    VFPPC_01438
Spliceosome [BR:pchm03041]
 Complex A
  U2 snRNP components
   U2 related factors
    VFPPC_01438
 Complex B
    VFPPC_01438
SSDB
Motif
Pfam: Surp CID
Other DBs
NCBI-GeneID: 28845264
NCBI-ProteinID: XP_018149905
UniProt: A0A179G7Q4
LinkDB
Position
1:complement(<5528306..>5530735)
AA seq 809 aa
MSSGKGHPTFPDVEAKLQKPTKQSAFERQKAEAEAKRKREAAETAAVYADFVKSFDRDDD
DDRRDAAAPSSFGGPSRGKPGFGGGPPPGHGASRRHFVSSGLKSGPGSLGPSPSAFTKKR
SFNDFKGGSRDRAGLLGFEEPESGSAATTSVAKAFNASDEEDMGDSRDRAEEKATSKPTL
RLTNLPPGTSPAVVKALIPDTLNVENVKIQPPAPSGPGGSERKCTIAIVTLSQETPANEM
DTAVSTLQNRYLGYGYYLSLHRHLSSAVAASANLPSLTSSSSGAHPFGAKPVEQPGGRDK
PSHHQQGFHRGFAPPSSYGQVGVGVNRSQLLHVPVRPPQDVRTIQLINKTIEGVLEYGPQ
FEALLMSRPDVQREERWAWIWDARSEGGIWYRWRLWQVVTGSEFNQVKGKYVPLFDGGDA
WKSPEKNLVFEYTTSLDEFVSDPEYNSSDDEDMDDATGDNNVAEMEKRFLSPLDKAKLVH
LLARLPTTLGKLRKGDIARVTTFAITHASRGADEVVDMIVANVEKPLSLTGANPEKKHET
KPNNPTTSTDEATANDGLDTSGASLVALYVVSDVLSSSSTSGVRHAWRFRQLFETALRER
KVFERLGMMAEKLGWGRLRAEKWKRSINLVLNLWEGWCVFPAESQELFVRTFESPPSLKA
EDKAEESSFRSKWKVVDALPAAKSDTSATAAAADGVHNPAAQDDVDGEPLDEDDVMGEPI
DDEDVEGEPIEEDDVAGEPIDEDELETEFMEQDGDGAQTEAAPPQTKSRDEDERAGAEGG
QESAGRSQQRKRLRAVDMFADSDDSGTEK
NT seq 2430 nt   +upstreamnt  +downstreamnt
atgtcatccggaaagggccaccccaccttcccagacgtggaggcgaagctccaaaaaccg
acgaagcaatccgcctttgaacggcaaaaagctgaagcagaagccaagcgcaagcgcgaa
gctgccgaaactgccgccgtatacgccgacttcgtaaagagcttcgaccgcgacgatgac
gacgacaggcgggatgcggccgcgcctagcagcttcggcggtccttctcgagggaagcca
ggttttggaggagggccaccaccgggacacggcgcctccaggagacactttgtttcttcg
ggactgaagagcggtcctgggagtctgggaccatcaccctcagctttcacaaagaagagg
tctttcaatgatttcaagggcgggtcgagggaccgagcgggattgctgggatttgaggaa
ccggaatctgggtccgctgcgacgacttcagttgccaaggctttcaacgccagcgatgag
gaagatatgggagattcgagggatcgggcggaagaaaaagcgacgtcgaaacctactctt
cgacttacaaacttgcctcctggcacgtcacctgctgtggtgaaggcgctgataccggat
actcttaatgttgagaatgtcaagatccaaccgcctgctccttctggcccaggtggctcg
gaaagaaagtgtacgattgctattgttactctttcgcaagagacgccggccaacgaaatg
gatacggctgtgagcacgttacagaaccgatatcttggctatgggtattacttgtcttta
catagacacttatcctccgccgtggcagcatcggccaatctcccaagtctgacatcctca
tcatctggtgctcatccctttggagcgaagcccgtagaacaacctggaggtcgagacaaa
cctagccatcaccagcaaggtttccatcgtggttttgcaccaccatcgtcgtatgggcag
gttggggttggcgtcaatagaagccaactgctacatgtgcctgtacggccgccacaagat
gtacggaccatacaactgataaacaagacgattgaaggagttttggaatacggtccccag
tttgaggcgctacttatgtcacgaccggatgtccagcgcgaagaaagatgggcctggata
tgggatgctagaagtgaaggtggtatctggtacaggtggagactctggcaggtcgtgacg
ggttcagagttcaaccaggtcaaaggaaaatatgttccattgtttgacggtggggatgca
tggaaatcaccagagaagaacttggtcttcgagtacacaacctctctggatgaatttgtg
tcagatccagagtacaactcgtcagacgacgaagacatggatgacgctacgggcgacaac
aatgtcgccgagatggaaaagaggtttttgagtcccctggacaaagcaaaactcgtccat
ctcctggcgcgactaccgactacgctgggcaagttgcgaaagggagatattgcccgagtt
acaacgtttgccatcacacatgctagccgtggtgcagatgaggtcgtggacatgattgtc
gccaatgtcgagaagccgctttcgttgacgggcgccaaccccgagaagaaacatgaaaca
aagccaaataatccgacaacatccacggatgaagcaacagcgaatgatggcttggatacg
agtggcgcgagtttggtggcactatacgtcgttagcgatgttctttcttcgtcgtcgacg
agcggagttcgacacgcctggcgttttcgacagctcttcgagacggcgcttcgagagcga
aaggtctttgaacggttaggcatgatggcagagaagctcgggtgggggcggcttcgtgca
gaaaagtggaagagaagcatcaacctggtcctcaatctgtgggaagggtggtgcgtattt
ccagccgagtcgcaggaactatttgttcgaacgttcgagtctccaccgtcgctcaaagcc
gaagacaaagctgaggagtcgtcatttcggagcaagtggaaggttgttgatgccctgcca
gccgcaaagagcgatacaagcgccacagccgcagcagctgatggtgtgcataaccctgct
gctcaagatgatgtcgacggagagcctctggatgaggatgatgtgatgggtgaacctatt
gatgacgaagacgtagaaggagaaccgatagaggaagacgacgtcgcaggggagcctatc
gacgaagacgagttggaaacagaattcatggagcaagacggggatggcgcccaaacagaa
gcggcaccaccccaaacaaagagccgggacgaagatgaacgggcgggcgccgaaggcggc
caagagtctgcgggccgaagccaacaacggaagcgactgcgtgctgtggatatgtttgcc
gactcggacgattctggcaccgaaaaatga

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