Pochonia chlamydosporia: VFPPC_01527
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Entry
VFPPC_01527 CDS
T09407
Name
(RefSeq) vacuolar sorting-associated protein (Vps27)
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03250
Viral life cycle - HIV-1
pchm04144
Endocytosis
pchm04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VFPPC_01527
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
VFPPC_01527
04145 Phagocytosis
VFPPC_01527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_01527
Membrane trafficking [BR:
pchm04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
VFPPC_01527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
FYVE
Vps27_GAT-like
UIM
GAT
CID
UIM_2
FYVE_CARP1-2
FYVE_2
Motif
Other DBs
NCBI-GeneID:
28845333
NCBI-ProteinID:
XP_018150008
UniProt:
A0A179G805
LinkDB
All DBs
Position
1:complement(<5850733..>5853239)
Genome browser
AA seq
745 aa
AA seq
DB search
MSWWSSSANTALDEQIERATSSSLEDIALNLEISDIIRSKTVAPKEAMRSLKKRIGNKNP
NTQLSALNLTDTCVKNGGSHFLAEIASREFMDNLVSLLQAVGVVAVNADVKAKILELVQQ
WAAATEGRYDLSYINEVYKTLQREGYQFPPRVTVASSMIDSSAPPEWADSDVCMRCRTAF
TFTNRKHHCRNCGNCFDQQCSSKTIPLPHLGIHAPVRVDDGCYAKLTGKGYKELGPPDRS
PTYPHKTRSTSAMQPRNARVDDGFDEDLKKALAMSLEEVKNSSRGYAEPTTNGTKPTKSS
SKQEEEEDADLKAAIAASLADMEEQKKKHAAALKEQTSSPSAGLSSGPFVLPKNDYELTP
VEAENINLFATLVDRLQTQPPGTILREPQIQELYDSIGTLRPKLARTYGETMSKHDTLLD
LHAKLSTVVRYYDRMLEERLSKAYSQQSLGGYNLPPPRQPAGPYPSMPPQPHSNPGVTES
FYTGQVPPNFQAPPAQSYQQQQQPPQATPQPQFSGYSQPPEPHQGQYAPPQRTDSWQGRV
PSAPQDPYQPQQAPSEPAQRIGTPQQAPVSPSTERRASYYFSSQQQQQPQPQQQQQQQQQ
PVTTPSGPSAPGPVPDATQSPYPNLQQSLQYQQPASVGAVPAQSTPIQPHAQPAQPARRP
SQPQAQLQSQQTPIARQQQPVQPQQPAQQQYWQPSTAQTPQQTPQQPPAAPQSWAYSGYQ
QPTFPSVPQHEPVKKPVQEEALIEF
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagctggtggtcatcttcggccaacacggcactggatgagcagattgaaagggcaacg
agtagcagcctagaggacattgctttgaaccttgaaatctccgacatcatcagatccaag
actgtggccccaaaggaggcgatgcggtccctcaagaagcgcatcggaaacaagaaccca
aatactcaactaagtgccttgaatctcacagatacatgtgttaagaatggcggatcgcat
ttccttgccgaaattgcttcacgcgagttcatggacaacttggtatcgcttttgcaagcc
gtcggggttgtcgccgtgaatgcggatgtcaaggccaagatacttgagcttgtacagcaa
tgggctgccgcgactgagggcagatacgacttatcctatattaacgaggtttacaagacg
ttacaacgtgaaggataccagtttcctcctcgggtgactgtggcgagcagcatgattgac
agcagtgcgcctcccgaatgggcggattccgacgtttgtatgcgctgtcgaacggcgttt
acgtttacaaatcgaaaacatcactgtagaaattgcggcaactgcttcgaccaacaatgc
tccagcaagacgatcccgttaccacacctgggcatccatgcaccagttcgagttgacgac
ggctgttatgccaagctgacggggaagggatacaaagaacttggccctcccgaccgatca
ccgacgtatccacataaaacccgaagcacgtcggcaatgcagcctcggaatgcacgagtg
gacgacgggttcgatgaagacttgaagaaggctctcgcgatgagtttggaagaagtgaaa
aacagttcaagaggctatgcggaaccaacgacaaacgggaccaagcccaccaagagctca
tcaaagcaggaggaagaggaggacgcagatttgaaggccgccattgcagcgtcattggct
gacatggaggagcagaagaagaagcatgcggccgcgttgaaggaacaaacttcgagcccc
tcggctggtttgtcgtcggggccattcgtcttaccgaagaacgactacgagttgactcct
gtcgaagctgagaatatcaatctcttcgccaccttggttgaccgtctccaaactcaacca
ccaggaacgatcttgcgggagccacagatccaggagctttacgacagtattggcaccttg
cggccaaagctagcgaggacgtatggtgagaccatgagcaagcacgacactttacttgat
ctccatgccaaactttccaccgtggttcgctactacgatagaatgctcgaagagcgcctt
tcgaaagcttacagccagcaaagcctcggcggctacaacctgcccccgcctcgtcaacct
gcaggtccatatccgtccatgccaccacaacctcatagcaatccaggtgtcacagaaagt
ttctacactggacaagtgcctcccaattttcaagcaccccctgctcaatcataccagcag
cagcagcaacctccacaagcaacccctcaacctcagttttctggttacagccaacctcca
gaaccacatcagggccagtatgcaccaccgcagaggacagatagctggcaaggacgggtt
ccatctgcacctcaagatccttatcaaccacaacaagcgccttcggaaccagcacaaaga
ataggaacgccgcagcaagctcctgtttcgccgtcgacggagcgccgggcttcgtactat
ttcagctcccagcagcagcagcaaccacaaccacagcagcagcagcagcagcagcagcag
ccagtaacgacgccgtctggtccgtctgctcctgggccggttccggatgcaacacagtcc
ccgtatcctaatctccagcagtcgctacagtatcagcagccagcctctgttggcgctgtt
cctgcccagtcgaccccaatacagcctcatgctcaaccagctcagcctgctcgtcgacct
tcacaaccacaggcacagctgcaatcacagcaaactccgatagctcgacaacagcaaccg
gtacagccacaacaaccagcccagcagcagtattggcaaccttccactgcccaaactccc
cagcaaactccccagcagccaccagcggcacctcagtcttgggcatatagcggataccaa
cagcctacgttcccgtcggtgccacagcatgagcctgttaagaaacctgtacaagaggaa
gctctcatcgaattttaa
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