Pochonia chlamydosporia: VFPPC_01549
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Entry
VFPPC_01549 CDS
T09407
Name
(RefSeq) elongation factor Tu GTP binding domain-containing protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
VFPPC_01549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_01549
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
VFPPC_01549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D3
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D2
Roc
Septin
AC_N
Motif
Other DBs
NCBI-GeneID:
28845346
NCBI-ProteinID:
XP_018150027
UniProt:
A0A179G813
LinkDB
All DBs
Position
1:5921357..5923965
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AA seq
831 aa
AA seq
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MAPADYYDDDDLYDEEADEGEQEDELSPEDKAAMEKGTADVKKSLGANATKVTVKQIQDA
LWHYYYDVDKSVAYLSKTFIAPPPPKPTPKKAPESKLHEFSFSSSLGLFVRSSGAANRLP
WSDSLPDPPPCSTFSYRSNANPVQDEFSDMPWLNTPESRQAMLIAPSKPRGGLLGGAGDA
PKMSKLQALAAARKKKNDDKKEQAKSSQAESGLKRLSIADASPKENDERASSPAKRQRVP
DAQAAPSLATLDGGSSRSEGPQEPHPDPVHIEVVRALQEPPEIEPSPPIQQDEETVKPFA
QSAPSAFAKTLFGSAPDDRQANRPDFYAMPYTSSSSFLAAAFSEPSPDDVVLAAQAKAGK
KTVAPAKGTSTPTKKDKKADVASKDVDVSNGISNLKVSDVPPPKSKGLDVAKEYEKSNSK
KSISFVVVGHVDAGKSTLMGRLLLELKYVQERTVDKYRRQAEKSGKQSFALAWVMDQRTE
ERERGVTIDIATNHFETPNTKFTILDAPGHRDFVPNMIAGASQADFAILVIDANTGAYEK
GLKGQTREHVLLLRSLGVQRIIVAVNKLDMVGWSKARFDEISDQISGFLTGLGFQSKLIS
FVPISGLNGDNIANKTEDASAAWYEGPTLIKALEDSEPSSALAITKPFRMSISEMFRSQQ
QGTTTLAGRIDAGNVQIGDAVIVQPSGEPAYIKSIMVDSEAQEWAVAGQSVTIALTDIDP
IHIRVGDILCSAVNPISVGDTFTMKAMAFEHLMPMPVDLHRGRLHAAGQIASIPATLDKA
TGEIVKKKPKIVQPGGVARVMIKLGAKVPLEKGQRVVLRSGGETIAAGLLE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggctcccgccgactactacgacgatgacgatctatacgatgaggaagcagatgagggg
gagcaggaggatgaactgagccccgaggacaaggcagccatggagaaaggcaccgcggat
gtgaagaagtcccttggtgctaatgccaccaaggtaacggtcaaacagatacaagacgca
ttatggcactactactacgacgtcgacaaatctgtcgcctacttaagcaagacgtttatt
gcaccaccgccgcctaaacctaccccgaaaaaagccccagagagtaagttgcatgaattc
tcgttttcatcatcgctcggcctgtttgtaagatcgtctggagctgcgaaccgattgcct
tggtcagactcattgccggaccctccgccttgtagtacattcagctacaggtcaaacgcg
aatcctgtccaagacgaatttagtgatatgccgtggctgaacacacctgagagccgtcaa
gccatgctgatagcaccctcgaagccacgaggcggattgcttggcggagctggagacgct
ccaaaaatgtccaagctccaagctcttgcggctgcgagaaaaaagaagaacgatgacaag
aaggagcaagcaaagtcttcacaagcagaaagtggcttgaagagattatcaattgcagat
gcatctccaaaagagaatgatgagagagcttcaagtcctgcgaaaaggcagcgtgtcccg
gatgcacaggcggctccgtcgctggcaactttggatggaggcagctctcggagtgaaggt
cctcaagaaccacaccccgatcccgtccacattgaagttgttcgcgctctacaggagccg
ccagagatagaaccatcgcccccaattcaacaggatgaagaaaccgtaaaaccatttgcc
cagtcagccccatccgccttcgccaagacccttttcggatctgctccagatgatcgacaa
gcaaacaggcctgatttttatgcaatgccttatacatcctcatcttccttcctcgctgca
gcattctccgagcctagcccggatgacgtcgttctggctgcgcaggcaaaagccggaaag
aagacggtagctcctgccaagggaacatccacgcccaccaaaaaggacaagaaggccgac
gttgcatccaaagatgtggatgtgagcaatggcatctcgaacttaaaggtcagcgatgtg
ccgccaccaaagagcaagggccttgacgtggccaaagagtatgagaaaagcaacagcaag
aagagcataagctttgtcgttgtcggccacgtcgatgctggtaagagcacgcttatgggg
cgtcttctgcttgaattgaaatatgtccaagagcgtacagtggacaagtatcgcaggcaa
gcagagaagtcgggaaagcagtcctttgctcttgcttgggtcatggaccaaagaacggaa
gaaagggaacgaggtgtcacaatcgacatcgccacaaaccacttcgagaccccaaatacg
aaatttaccatcctggacgcgcctggtcatagggattttgtgccgaatatgattgcaggc
gcaagccaggccgatttcgccattcttgtcattgacgcaaatactggagcttacgaaaag
ggtctcaagggacaaacaagagagcacgtgttgttgctgcgcagtcttggcgtccaacgc
atcattgtcgccgtcaataaactcgacatggttggttggtcaaaagctcgattcgacgag
atttccgaccaaatcagcggctttctcactgggctagggtttcaaagcaaactaatcagc
tttgtgcccatatccggcctgaatggggataacattgcaaacaagactgaggacgcatca
gcggcatggtatgagggaccaacgttaattaaggcgctggaagactcggagccgtcgtcg
gctcttgccatcacgaaacccttccgcatgtcgatttcggaaatgtttcgatcacagcaa
cagggtacaacaacactagctggtcgcatagatgcaggcaacgttcaaatcggcgacgcg
gtcattgtacagcccagcggagagcctgcgtatataaaatctatcatggtcgattcggag
gctcaagaatgggcagttgctggtcaaagtgtcaccatcgccttgactgacattgacccc
attcatatccgtgtcggtgacattctatgcagcgcggtgaacccaattagcgttggcgac
acgttcactatgaaagctatggcgtttgagcatctgatgccgatgccagtggaccttcac
cgtggtcgtctgcatgcggcagggcaaatcgcctcaataccggcaacgctcgacaaggct
acaggcgagattgtcaagaagaagcccaagattgttcagcccgggggcgtggctcgcgtg
atgattaaactgggggccaaggtacctttggaaaagggacaaagggttgtccttcgcagt
ggaggagaaactattgcggcaggcttactagaataa
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