KEGG   Pochonia chlamydosporia: VFPPC_02015
Entry
VFPPC_02015       CDS       T09407                                 
Name
(RefSeq) RNA polymerase II subunit 3
  KO
K03011  DNA-directed RNA polymerase II subunit RPB3
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03020  RNA polymerase
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    VFPPC_02015
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPPC_02015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchm03021]
    VFPPC_02015
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_02015
Transcription machinery [BR:pchm03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     VFPPC_02015
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      VFPPC_02015
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L Calycin_like DUF2460
Other DBs
NCBI-GeneID: 28845735
NCBI-ProteinID: XP_018138793
UniProt: A0A179F6B3
LinkDB
Position
1:7634049..7635257
AA seq 354 aa
MDGMDYDPMVMDGEPEQPQVTISAADNTRVDFALSKTNLSFANSIRRIIQAEVPTIAIDL
VEVEVNTSVLADEFIAHRLGLIPLNAKGVNELNYSRDCDCEQYCEQCSVTLTLHARCTSD
EIMKVYARDLVVDGRHASQVGTPVINDPEGMGCLIAKLRKDQELKLTCIAKKGIAKEHAK
WMPTSAVGFEYDPHNKLHHLDLWYENNTDPNKEWPKSKYAEWEDPPQEGEPFNYDAVPDR
FYFEVETSGSMEPDQIVQGGIRALQQKIGALLKGLDPKKYGGEEPAEFDGPRSPDMNMDG
GTTPWQDGGYTTPYGGNMTAYGGGNTAYGGGNNTAYGGGAGAYGTTPYGQSSWQ
NT seq 1065 nt   +upstreamnt  +downstreamnt
atggacggcatggattatgatcccatggtgatggacggcgagcctgagcagccccaggtc
accatctcagctgccgacaacacacgcgttgactttgcgctctccaaaaccaacctctcc
ttcgccaactcgatacgcagaatcatccaggccgaagtgccaaccattgccatcgacctc
gtcgaagtcgaggttaacacgtcagtacttgccgacgagttcatcgcccacagactgggt
ctcattcccctcaacgccaagggtgtaaacgaactcaactactcacgagattgcgactgc
gagcaatactgcgaacagtgcagcgttaccttgactctgcatgcgagatgtaccagtgac
gagattatgaaggtgtacgcgcgggatttggtcgttgacggccgccatgccagccaggtc
gggacgccggtcatcaacgatcctgagggaatgggatgtttgattgccaagctgcgcaag
gaccaggaattgaagctcacgtgtatcgcgaagaagggcattgccaaggaacatgccaaa
tggatgcctacgtctgccgtaggtttcgaatacgaccctcacaataagttgcatcacttg
gacctgtggtatgaaaacaatacggatcccaataaggaatggcctaaaagcaaatacgcc
gaatgggaggatccccctcaagaaggagagccgttcaactacgacgcagtccccgatcga
ttctacttcgaagtcgaaacgtcaggcagcatggagcccgaccagattgtgcaaggcggc
atccgcgctctccaacaaaagattggtgcgctcctaaagggcctggatcccaagaagtac
ggcggagaggagccggccgagtttgacggcccgagaagtccagatatgaatatggacggt
ggcacgacaccctggcaagacggaggatacaccactccctacggcggcaacatgactgcc
tatggtgggggaaacactgcgtacggaggaggcaacaacacggcatacggagggggtgcc
ggcgcatacggaaccacgccctatggccagtcgtcgtggcagtaa

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