Pochonia chlamydosporia: VFPPC_02015
Help
Entry
VFPPC_02015 CDS
T09407
Name
(RefSeq) RNA polymerase II subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03020
RNA polymerase
pchm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VFPPC_02015
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_02015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_02015
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_02015
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
VFPPC_02015
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
VFPPC_02015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Calycin_like
DUF2460
Motif
Other DBs
NCBI-GeneID:
28845735
NCBI-ProteinID:
XP_018138793
UniProt:
A0A179F6B3
LinkDB
All DBs
Position
1:7634049..7635257
Genome browser
AA seq
354 aa
AA seq
DB search
MDGMDYDPMVMDGEPEQPQVTISAADNTRVDFALSKTNLSFANSIRRIIQAEVPTIAIDL
VEVEVNTSVLADEFIAHRLGLIPLNAKGVNELNYSRDCDCEQYCEQCSVTLTLHARCTSD
EIMKVYARDLVVDGRHASQVGTPVINDPEGMGCLIAKLRKDQELKLTCIAKKGIAKEHAK
WMPTSAVGFEYDPHNKLHHLDLWYENNTDPNKEWPKSKYAEWEDPPQEGEPFNYDAVPDR
FYFEVETSGSMEPDQIVQGGIRALQQKIGALLKGLDPKKYGGEEPAEFDGPRSPDMNMDG
GTTPWQDGGYTTPYGGNMTAYGGGNTAYGGGNNTAYGGGAGAYGTTPYGQSSWQ
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggacggcatggattatgatcccatggtgatggacggcgagcctgagcagccccaggtc
accatctcagctgccgacaacacacgcgttgactttgcgctctccaaaaccaacctctcc
ttcgccaactcgatacgcagaatcatccaggccgaagtgccaaccattgccatcgacctc
gtcgaagtcgaggttaacacgtcagtacttgccgacgagttcatcgcccacagactgggt
ctcattcccctcaacgccaagggtgtaaacgaactcaactactcacgagattgcgactgc
gagcaatactgcgaacagtgcagcgttaccttgactctgcatgcgagatgtaccagtgac
gagattatgaaggtgtacgcgcgggatttggtcgttgacggccgccatgccagccaggtc
gggacgccggtcatcaacgatcctgagggaatgggatgtttgattgccaagctgcgcaag
gaccaggaattgaagctcacgtgtatcgcgaagaagggcattgccaaggaacatgccaaa
tggatgcctacgtctgccgtaggtttcgaatacgaccctcacaataagttgcatcacttg
gacctgtggtatgaaaacaatacggatcccaataaggaatggcctaaaagcaaatacgcc
gaatgggaggatccccctcaagaaggagagccgttcaactacgacgcagtccccgatcga
ttctacttcgaagtcgaaacgtcaggcagcatggagcccgaccagattgtgcaaggcggc
atccgcgctctccaacaaaagattggtgcgctcctaaagggcctggatcccaagaagtac
ggcggagaggagccggccgagtttgacggcccgagaagtccagatatgaatatggacggt
ggcacgacaccctggcaagacggaggatacaccactccctacggcggcaacatgactgcc
tatggtgggggaaacactgcgtacggaggaggcaacaacacggcatacggagggggtgcc
ggcgcatacggaaccacgccctatggccagtcgtcgtggcagtaa
DBGET
integrated database retrieval system