Pochonia chlamydosporia: VFPPC_02100
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Entry
VFPPC_02100 CDS
T09407
Name
(RefSeq) ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04120
Ubiquitin mediated proteolysis
pchm04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
VFPPC_02100
04120 Ubiquitin mediated proteolysis
VFPPC_02100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchm04121
]
VFPPC_02100
Enzymes [BR:
pchm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
VFPPC_02100
Ubiquitin system [BR:
pchm04121
]
Ubiquitin ligases (E3)
U-box type E3
VFPPC_02100
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
ATG30_helical
Efg1
Motif
Other DBs
NCBI-GeneID:
28845803
NCBI-ProteinID:
XP_018138886
UniProt:
A0A179F6Q2
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All DBs
Position
1:complement(<7940559..>7944298)
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AA seq
1123 aa
AA seq
DB search
MDPNEQPPQSGPDDTPDKDHASLKSSYSTINTAPMRARRIAMLSNIARKPNESSDQASAS
SSSTPAPKPQASEPAAPKKPTINVTPAAKPAQSSPNPFTQLGVQNTKAAGDESSSTGTSR
PSRKRSAPDVDDADSASAPRKPTPQPAQQQQQQKTETDEDYAHRVLSQIFRVSVDPHHMT
NPQGQRLVFLPSLNQELNDSGEALKLSIGTLDQAIIEACSNWALNKPLFEYLLPCWKRAV
KASTTAAKNVTPSRQEILEEAKRLCMSNCLFALTMPALYGRDPNPQHDTLVPYLLKGIQD
DGGLCFDFIREATKRFDDDEAFPALFNDAMVNISSQLSALSLGDDYKPYVQALLIYTRFP
ILITNLAQHPCFNMAQSAHNIERHTILGPFFRISPLQPDAIKSYFPGARSLDKVRIANAQ
ESLRIVLRAHQDDLFVIANAFIRAGPDTRSRTLDWFAYIMNTNHKRRAMQVDPREVASDG
FMLNVTTIMDRFCEPFMDNDFSKVDKIDARYFRRQPRVDITDETKLNADQATADKYYSEK
VEGDSNFISEAFFLTLAAHHYGSEALNSQLKNLDREIKYLDKHIKAMEAERPKLINSPQL
RLFEETLKRHTNVLEKTIALKYSIEGALLDERMQSTSLRFMRYVAVWLLRLATGSNYKPG
LESQMIKLPLSEDNSEVFACLPEYTLQNIVDNFKFVFRFLPKILPSAVGEEMIALCITFL
RSSEFIKNPYLKSSLVSLLFYGTWPFMHLKKGVLGDQLMALPFANEYLLHSLMKFYIECE
STGANTAFYDKFNIRYEIFQVIKCVWSNDVYKQQLTRESKTNRDFFVQFVNMLLNDATYV
LDEAFTKFPKIRSLERELENPSLSAEDRQKKEEELQTLGGQATSYMQLANETLEMMKLFT
KALSDSFTMPEIVSRLASMLNYNLETLAGKKAAAELSVSNKDKYHFRPIQLISDFVDIYL
HLGYSKVFVDAVAADGRSYKPEVLDRVTRILSSKNAKDPAELARWEKVKTMFADAKLELD
QAELDLGDIPAEFEDPIMGELMKDPVLLPSRHIVDRSTIVQHLLSDAKDPFTRQPMTIDD
AIPQADLKERIDRWREERIKIAKDKVAATAGSGEEQQMDTSEG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacgaacaacctccccagagcgggccagacgataccccagataaagatcat
gcaagtctcaaatcctcatattcaacaattaatactgcacctatgcgagcacgccgtatc
gccatgctgagcaacatagcgcgcaaacccaacgagtcgtccgaccaagcttcggcttcc
tcgtcatcaacaccagcacccaaaccacaagcttccgagcccgctgcccctaagaaacca
acaatcaacgtgacgccggctgcgaagccagcacagtcgagcccaaatcccttcacacaa
cttggtgtacaaaacaccaaggcagctggagacgaatcgagctctacaggtacttcccgt
ccttctcgcaaacggtccgcacctgatgttgacgacgccgattcagcatccgccccccgt
aaaccaactccgcaaccagcccagcagcagcaacagcaaaaaacagagaccgacgaggac
tatgcacatcgtgtgctgtcacaaatcttccgtgtttccgttgatccacaccacatgacc
aacccgcaaggtcaacgcttggtcttcctgcccagcttgaaccaagagctaaacgattcg
ggagaagcgttgaagttgtccatcggcaccttggatcaagccataatagaggcttgtagc
aactgggccttgaataagcctctttttgagtatctgctgccgtgttggaaacgagccgtc
aaggcttccaccactgctgccaagaatgttacgccatcaaggcaagagattctagaagag
gccaagaggctttgtatgagcaattgtctgtttgccttgaccatgccggcactttatggg
cgagacccgaatccccaacatgatacgttggtgccatatttgttaaagggtattcaggat
gatggtggcctttgctttgacttcatcagagaagctacaaagcgttttgacgacgatgaa
gcctttcctgctctctttaatgatgccatggttaacataagctctcagctctctgccttg
tcactgggtgatgattataagccctatgttcaggcccttctcatatatactcgttttcca
atcctcatcaccaatctcgcccaacatccttgcttcaacatggcgcaatctgcgcataat
attgagagacacactattttaggccccttcttccgcatctctcccctccaaccggacgct
atcaagagctacttccccggagcacgatctcttgataaagttcgaatcgccaacgctcaa
gaatcattaagaatagttctgagagcgcatcaagacgacttgttcgtaatcgcaaatgcc
tttatccgtgctggccctgacacgaggagtcggacgctcgactggtttgcgtacatcatg
aacacgaaccacaagcgaagagccatgcaggttgaccctagagaagttgcctcagatggt
ttcatgctcaatgtgacgaccatcatggaccgattttgcgaacctttcatggataacgac
tttagcaaggtggacaagattgatgcgcgctacttcaggaggcaaccacgcgttgacatc
acagatgagaccaagctaaatgcggatcaagccaccgccgataaatactactccgaaaag
gtcgaaggagactccaacttcatatcggaggcttttttcctcacactagcagcgcatcat
tatggaagcgaagccctgaattcacagctcaagaacctggatcgtgagattaagtacctg
gacaagcacatcaaagcaatggaggctgaacgccctaaactgatcaattccccccaactt
cgactgtttgaggaaaccttgaaacgacacacgaacgtattggagaagacgattgcactg
aagtattcaatagagggcgcattgctcgacgagaggatgcagagcacgtcactacggttc
atgcgctacgtagccgtttggctcctacggctggccacaggctccaattataaacctggc
ctagagtctcaaatgatcaaattacccttatccgaggacaactcggaggtgtttgcctgt
ctccccgaatataccttgcaaaatatcgtagacaatttcaagtttgtctttagattcctg
ccaaaaattctcccaagtgctgttggcgaggaaatgattgcattgtgtatcacttttctt
cgatcatctgaatttatcaagaacccgtacctcaaatcctctctagtttcactattattc
tacgggacatggccgtttatgcacctgaaaaagggagtcttgggcgaccagctgatggca
ctcccattcgctaacgagtatctcctgcactccctgatgaagttttatattgaatgcgag
tctaccggggccaacactgccttttatgacaaatttaacattcgatatgaaatcttccag
gttatcaagtgcgtttggagcaacgatgtttacaaacagcagctgacgcgggaaagcaag
actaaccgcgatttcttcgtacaatttgtaaacatgttgctcaacgatgccacctatgtc
ttggatgaggcttttactaagttccccaagatcagaagtctcgagcgagaactcgagaac
ccttcactctcagccgaggaccggcaaaagaaggaagaggagctgcaaacactgggtggt
caggctacctcgtacatgcagcttgccaacgaaaccttggagatgatgaagttgtttacc
aaagcccttagtgactcctttaccatgcctgaaatcgtctcccgattagcgagcatgttg
aactacaacctggagacattggccgggaaaaaggctgcagcagagctatccgtctctaac
aaggacaaataccatttccgtcccatccaactgatttccgactttgtcgacatatacctc
cacctcggctactcaaaagtctttgtggatgccgtcgcagcagatggtcgatcctataaa
cccgaagtgctcgaccgtgtcacccgtattctatcctccaagaatgccaaagaccccgcc
gaattagcaaggtgggaaaaagttaaaaccatgtttgcggatgccaaactcgaactggac
caggcagagcttgatctgggcgatatcccggctgagtttgaggatcccatcatgggtgaa
ctgatgaaggaccccgtgcttctacctagccgtcacattgtagatagatcgactattgtg
cagcatttactgagcgacgccaaggatccgtttacacgacagcccatgaccattgatgat
gctattccgcaggcggatctgaaggagaggattgatagatggagagaggaaaggatcaag
attgcaaaggacaaggttgctgctactgctggcagcggggaggagcagcaaatggatact
tcggagggttaa
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integrated database retrieval system