Pochonia chlamydosporia: VFPPC_02174
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Entry
VFPPC_02174 CDS
T09407
Name
(RefSeq) ATP-dependent RNA helicase DRS1
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchm03041
]
VFPPC_02174
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_02174
Enzymes [BR:
pchm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VFPPC_02174
Spliceosome [BR:
pchm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
VFPPC_02174
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-60S particles
Helicases
VFPPC_02174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
28845863
NCBI-ProteinID:
XP_018138975
UniProt:
A0A179F6S3
LinkDB
All DBs
Position
1:complement(<8226185..>8229356)
Genome browser
AA seq
992 aa
AA seq
DB search
MAPQKRKPVEDDFITTLSDNDEDPFQEETASAPPPKKKAKINKKLKKASKDNEDSDEEEP
QGIWGRKDDDDGAMNPDFEFVADDAGEFGDEEFEGWGFEGAKKGMSEKKGVDLEDIIRRR
REKKNGKTEETLENGDDEAELENDLDVALDDDDDEVLADDAFGMNVDSEAEEDEEAEGEG
DEDEDASDGPGKAGQADSDDEPASDDDSVATPEAHPDDEVSDGSDDEEDAEEQAKRDAFF
APEEKQTTDKKLDMSSFQGMSLSRPILRGLTAVGFTKPTPIQAKTIPIALMGKDLVGGAV
TGSGKTGAFFVPILERLLFRPKKIPTTRVVVLTPTRELAMQCHDVGTKLARYTDIKFTLA
VGGLSLKAQEVELRLRPDVIIATPGRFIDHMRNSASFNVDTVEILVLDEADRMLEDGFAD
ELNEILTTLPKSRQTMLFSATMTSTVDRLIRVGLNKPVRLMVDSQKKTVTTLVQEFVRLR
PGREGKRMGYLAHICKTFYHERVIVFFRQKKEAHKARIVFGLLGLSCAELHGTNMILTRP
SLQRIASVESFRDGKVSYLLATDLASRGLDIKGVDTVINYEAPQSLEIYVHRVGRTARAG
RKGTAVTLAAEADRKVVKAAVKAGKAQGAKITSRVIAPADADKLQDEIDEMEDEIEEIVR
EEKEEKQLAQAEMQVKRGENLIEHEAEIKSRPKRTWFETEHDKKKAKQAGKDELNGLRDS
LKKKGSGKLSNKDKKTLDAKAMRSEGRLWKKGKGDAEAHKGKGPGKGKGKPKARGKPKGK
IVNIGIEYTVNLERIHRDVKTSQMVYFQTDVNWHWVIMSAPPADSHQWNSSIQVQPSAGQ
WSSQTGPDLLLHFDLSLSSSNHHHESELSTILGQLHHLNLHLTTLHAITPRLANFVHPVT
ALHSGTAWARRSRTPTLNRPRAAPKAPDKTVSQPSGGCTQAQHPDDQSQVLSSPLTTAHH
PRAPCANQQPYSPISSPLNPVAAPCQKTGRFI
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcaaaagagaaagccagtcgaagacgacttcataaccactctttccgacaac
gacgaggaccctttccaagaagaaacagcctccgctcctccaccaaagaagaaggcaaag
atcaacaaaaagttgaaaaaggccagcaaagataatgaggattcagatgaagaagagcct
caaggaatttggggccgcaaggatgacgacgatggcgctatgaatcccgactttgagttc
gtagccgacgatgctggggagtttggcgatgaggaatttgaaggctgggggtttgagggt
gctaagaagggaatgtccgagaagaaaggagtggatctagaagatattatccgtcgacgt
agagaaaagaagaatggaaagacggaggagaccttggaaaatggtgatgacgaggcggag
ctggagaatgacctggatgtggccttggatgatgacgatgacgaggtattggcagatgat
gcctttggtatgaatgtcgactctgaggctgaggaagatgaagaagcggagggagaagga
gatgaggacgaagacgcatctgatggtcccggcaaggctggacaggctgacagcgacgac
gagccggcttccgatgatgattcagtagcgactccagaagcccatcccgacgacgaagta
tccgatggcagcgacgacgaagaggatgccgaggagcaagcaaaaagagacgccttcttt
gcgcccgaagaaaagcaaacgacggacaaaaaactggacatgtcttccttccaaggcatg
tcactgtctcgtccgatccttcgtggtcttaccgcagttggcttcaccaaacccacccct
atccaggccaagactattcccatcgccctcatgggcaaggatctcgtcggtggcgcagtc
actggttcaggcaaaactggcgcattctttgtcccgatactggagcgattgttgtttcga
cccaagaaaatcccgactactcgcgtcgttgttctcacccctacccgtgaattggccatg
caatgtcacgacgttggtaccaaactggccaggtataccgacatcaagttcactctggct
gtcggtggtctcagtctgaaggctcaagaggttgaacttcgattacggcccgacgtaatt
attgcaacaccaggtcgatttatcgatcacatgaggaactcggccagcttcaacgttgac
acagtggaaatcttggttctggacgaagccgatcgcatgctggaagatggatttgcagac
gaattgaacgaaattctcacaacgctgcccaagtcaagacaaacgatgctgttttcagcc
accatgacctcgactgttgatcgtctcatccgggttggcctgaacaaacccgtacgattg
atggttgattcacaaaagaagacagttacaactttggtacaagaatttgttcgacttcga
ccgggtcgagagggaaagagaatgggttatcttgcacacatctgtaagacattttatcac
gagagggttatcgttttcttccgccaaaagaaggaagcgcacaaagctcgcatagttttt
ggtctattgggtttatcatgtgccgagttgcatggaacgaacatgatattaacacggcct
tctctacagcgtattgctagtgttgagtcgttcagagacggcaaagtgtcgtatctactt
gcaacagatcttgcttctcgtggtttggatatcaagggtgtcgatacggtcatcaactac
gaggcgcctcaatctcttgaaatctacgtacatcgtgttggtcgtacagcccgtgccgga
cgaaaaggcacagccgtcacactggcggcggaggcagaccgtaaagttgtcaaggccgca
gtcaaggctggaaaagcacaaggcgccaaaattacgagcagagtgatcgcccctgcagat
gcagacaaattacaggatgaaattgatgagatggaggacgaaatcgaagagattgtccgt
gaggaaaaggaggagaagcaattagcacaggcggaaatgcaagtgaagaggggcgagaac
ttgattgaacacgaggcggagatcaagtcaagacccaagagaacgtggtttgagactgag
cacgataagaagaaggccaagcaagctggcaaggacgagctaaacggattgcgcgactcg
ttgaagaagaagggcagtggaaagttgagtaataaggacaagaaaacgcttgacgccaag
gccatgagatcggagggcagattatggaagaagggcaaaggcgatgcggaagcacataag
ggcaaagggccaggcaaggggaaaggaaagccaaaagcaagaggcaaacccaaagggaaa
attgtaaatattggcattgaatatactgtcaatcttgagcgtattcatcgtgatgtcaag
acgagccaaatggtttatttccaaactgatgtcaattggcactgggtgattatgtcagcc
ccgccagcggactcgcaccaatggaacagcagcattcaagtccagccgagtgctggtcag
tggagcagccagactggacctgacttgctcctgcactttgatctctcactctcatccagc
aatcaccatcacgagtccgagctctccactatccttggccagcttcatcatctcaatctc
catctcacaacactccacgccatcacaccccgtcttgctaatttcgtccatcccgtcact
gcgttgcactctgggaccgcctgggccagacgctcgcgcacgccaacattgaacagacct
cgcgccgcgccaaaagcaccagacaagacagtatcccaaccctctggtggctgcacgcag
gcacagcatcctgacgaccagagtcaggtgctctcatcaccgctcaccaccgctcaccac
ccccgtgccccatgcgcgaaccaacagccctacagtcccatctcatcaccattgaatcca
gtcgcagccccctgtcagaagacggggcggttcatctga
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