Pochonia chlamydosporia: VFPPC_02426
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Entry
VFPPC_02426 CDS
T09407
Name
(RefSeq) SDA1 domain-containing protein
KO
K14856
protein SDA1
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_02426
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
VFPPC_02426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
Motif
Other DBs
NCBI-GeneID:
28846068
NCBI-ProteinID:
XP_018146393
UniProt:
A0A179FW24
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All DBs
Position
2:complement(<966319..>968674)
Genome browser
AA seq
739 aa
AA seq
DB search
MVKRKVAALEKIDADFASLQYKIRRDPKSYKDDFLKQWEQYESQREIFLMNPTGGTADSI
ESFHNMIDLIAHVADCYPAETKTYPDDLKLILNEHHTVLHPDLRDKIVGSLVLLRRKDVI
DSASLLTTLFPILVSSPSKTLRELLFQKILSDMRNSNSKAINHPLNRTVQTVLYNLVTAD
RSSPRAIWAIKLTRELWKRQIWTDSKPVDVMKEACLSDNEKVVIGATRFFLGGDKEREEL
EDDSSDDEIDLSKIRHQIGINKKTKKQKKTYEKAVNKVRRDQQKKAKPHPLNFSALHLLH
DPQGFVEQLFSKHLQNTKSKLSLDSKILVLQLVTRLVGLHKLTVVALYSWFIKYLSPRQQ
SVTSILASLAQGTHNLVPPDVLEPLIQKIANEFVSEAAASEVAAAGLNSIREICARQPLA
MTDTLLQDLVQYRKSKDKGVMMAAKGLLSLYREVGAELLQKKDRGKDATIGLKSGLQHQQ
RFGEEAVGGIEGLDLLAKWKDEETKKKRLAKGLPETPESDEEQDKEADGFDSDEWEVGSE
DSSDSGDWINVDHSDEEAPAAKKQKHDDDTPNPEDDPESAAAQLQRMQLLATTTILTPAD
LAKLQELRASAAIESAASGHRRKRNNTANTNGTLDDGLTAENIEAPAKLRKLTKEEKIAL
AKEGKPDREEHKSTQAIKKSKKEAAGKSTSNREKARKKNFLMTLGKAKSKQKRSLVETRK
VLKGHVERSTRGGRRRNFA
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagagaaaggttgcagctctggaaaagatcgacgcggacttcgcgagtttgcag
tacaaaattcgtcgagatccaaaatcgtacaaagatgacttcctcaaacaatgggagcaa
tatgaatcccagcgcgaaatcttcctcatgaacccgaccggcggaacggccgactccatc
gaatctttccacaacatgattgacttgattgctcacgttgccgattgctaccccgcggaa
acaaagacatacccagacgacttgaagttgatcctcaacgaacaccataccgtgctgcat
cctgatcttagagacaaaattgtgggaagtctggtgcttcttcgacgcaaagatgtgatt
gattcagcgagcttgctgaccaccttgtttccaatcctggtgtcgtcgccgagtaaaaca
ctacgcgaactgttatttcagaaaattctgagcgatatgcgaaactcgaattccaaggcg
ataaaccacccgctgaaccgaacggtacaaacagttctatacaacttggtcactgcagac
cgatcgtcgcccagggcaatttgggccatcaagttgacgcgcgaactgtggaagcgacaa
atctggacggattccaaacccgtcgacgtgatgaaggaggcgtgcttgtctgacaacgaa
aaggtggtgattggtgcgacacgcttcttccttggtggagataaagaaagagaagagctg
gaagacgatagcagtgatgacgagattgacttgtccaagataaggcatcagattggcatc
aataagaagacgaagaagcagaaaaagacgtacgagaaggcggttaacaaggtgcgccgc
gaccaacagaaaaaagccaaacctcacccgctcaacttctcggctctccatctgctacat
gacccgcaggggtttgtcgaacaactcttctcaaagcaccttcaaaacaccaagtccaag
ctgtcgctggattccaagatcctggtcctgcaactagttacgcgactggttggtctgcac
aaactgacagtcgtggcattatactcgtggttcatcaagtatctcagtcctcgacaacaa
tcagtcacttccatcctagcatccctggcacaaggaacccataacctggtgcccccggat
gtcctcgagcctctgattcaaaagattgcaaacgagttcgtctctgaagcagccgcctca
gaagtcgcagccgccggtttaaactccatccgcgaaatctgcgccagacaaccactagcc
atgacagacacattactacaagatctcgttcaataccgcaagagtaaagacaagggcgtc
atgatggcagccaagggcttgctctcactgtaccgagaagtcggcgcagaactactacaa
aagaaggacagaggcaaggacgccacaatcggcctcaagagcggcctgcaacaccagcaa
aggttcggtgaagaagcagtcggcggcattgagggcctcgacctcctcgccaagtggaag
gacgaggaaaccaagaagaaacgactcgcaaagggtctccccgaaacccccgaaagcgat
gaagaacaggacaaagaagcagacggcttcgactcagacgagtgggaagtcggctccgaa
gacagcagcgactcaggcgactggatcaacgtcgaccactccgacgaagaagccccggca
gccaagaaacaaaagcacgacgacgacacacccaacccagaagacgaccccgaatccgca
gccgcccaactccaacgcatgcaactcctcgccacgaccaccatcctcacacccgccgac
ctcgccaaactccaagaactccgcgcctccgcggccatcgagtccgccgcctctggccac
cgccgcaagcgcaacaacaccgccaacacaaacggcaccctagacgacggcctaacagcc
gagaacatcgaagcacccgccaaactgcgcaagctgaccaaggaggagaagattgcgctc
gcaaaggaaggcaagcccgatagagaggagcacaagtccacgcaggccatcaagaagagc
aagaaggaggccgcgggcaagagcaccagcaacagagagaaggcaaggaagaagaacttc
ctcatgacgctgggcaaagcgaagagtaagcagaagaggagtttggtcgagacgagaaaa
gtgcttaaggggcatgtggagcggagtacgaggggtgggaggaggaggaattttgcgtag
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