Pochonia chlamydosporia: VFPPC_02669
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Entry
VFPPC_02669 CDS
T09407
Name
(RefSeq) DNA topoisomerase III
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03440
Homologous recombination
pchm03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VFPPC_02669
03460 Fanconi anemia pathway
VFPPC_02669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pchm03032
]
VFPPC_02669
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_02669
Enzymes [BR:
pchm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VFPPC_02669
DNA replication proteins [BR:
pchm03032
]
Eukaryotic type
DNA Topoisomerases
VFPPC_02669
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
VFPPC_02669
FA (Fanconi anemia) pathway
VFPPC_02669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
EBV-NA1
DUF4719
Motif
Other DBs
NCBI-GeneID:
28846274
NCBI-ProteinID:
XP_022284562
UniProt:
A0A179FWZ2
LinkDB
All DBs
Position
2:complement(1756200..1758708)
Genome browser
AA seq
709 aa
AA seq
DB search
MRVLCVAEKPSISKAVAGHLSGGSMQTHNTRNQYIKNYSFDFDFGQPWGSCSVTMTCVTG
HLTAVEFTNEYKNWSYPPPETLFNAPIVTNVYDDKKTIAKNLADQAKYARLLVIWTDCDR
EGEHIGQEIVDAARKGNADIQVKRAKFSNVERAHVLSAARRLIDLDGRQVDAVSTRIELD
LRIGYAFTRFMTNSLRPLGGPMENLTLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWSIKV
MHNRDGKKVNFSWARNRLFDRMTTILLYERCLAAKTAKVANVQEKPTRKYKPLPLTTVEL
QKAATRLLRISGQQAMSIAENLYNKGFISYPRTETDRFDKGMNLKALVQKQTPDQRWGQF
AQGLVNGAFKQPREGKHDDKAHPPIHPITYAAPSVLNFDESRLYEYVVRRFLACCSEDAV
GMATDVDLQYADENFSAHGVIVLERNYLDVFIYDKWENTIELPKFTKGETFQPTEAMMTE
GKTSPPNYLTEADLIALMDANGIGTDATMAEHIQKIQDREYVATIERSGATAGDDADGTQ
DEILSSSRGGRGRGRGRGGRGRGNSTLSNGRRGGIRVFVPTQLGVALILGYDRMNFETSL
GKPFLRKEMELKMKAICEGRTTRAVVLRESITQYRQVFMQTQEKLDVLRAACREFVFAQP
ALDQSCCDPTTDPEVRQIDTGNPRNRRRKCLDLYPSLDWAQSDNGLGNA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagggttctttgtgtggctgaaaagccttcaatttccaaggctgttgccggccacttg
tctggtggaagcatgcaaacccacaatacaaggaatcaatacatcaagaactactcgttt
gatttcgactttggccaaccttgggggtcatgttccgtcacaatgacctgcgtcactggt
caccttaccgctgtcgagtttaccaacgagtacaagaattggagctatcctccgccagag
actttgttcaacgctcctatagttaccaatgtttacgatgataagaagactatagccaaa
aacctagcagaccaagccaagtacgcccgtcttttggtgatatggacggattgcgatcgt
gaaggcgaacatatcgggcaggaaattgtggacgctgctcgcaaaggtaatgccgatata
caagtcaagcgagccaagtttagcaatgttgaacgagcccatgtcctctctgcagccaga
agattgattgatctggacgggaggcaagtcgatgccgtttctacaagaattgaacttgac
ctgcgcatcggttatgcgtttacacgattcatgacgaatagcctgcggccgcttggtggt
ccaatggaaaatctaacgctgagctacggatcttgccagtttcccacattgggtttcgtg
gttgatcgatattttcgtgtcaagaatttcgttccagaaccattctggagtatcaaagtc
atgcacaatcgggacggcaagaaagtgaacttcagttgggctaggaatagactttttgat
cgcatgacaaccattcttctttacgaaagatgcctcgcggcaaaaacagcaaaagtggcc
aacgtacaagaaaagccgacacggaaatacaagcctttgccactgacgacggtcgagctc
cagaaagctgctactcgcctacttcggataagcggtcaacaagctatgtcgattgcggaa
aacttatacaacaaggggttcatatcttatcctcgcactgagactgatcgatttgacaaa
ggcatgaatttgaaggcgctggtccagaagcagactccagaccaacgatggggccaattt
gctcaaggcttggtcaatggagcgtttaaacagccacgagaaggcaagcatgacgacaag
gcacatccaccaatccatcccatcacctatgcggcacctagcgtcctaaacttcgacgaa
agccgtctatacgaatatgttgtccgacgatttctggcgtgttgctctgaagatgccgtc
ggcatggctaccgacgttgatctgcaatatgcagatgagaacttcagcgcgcacggtgtt
attgtgctcgagagaaactatcttgatgttttcatatacgacaagtgggaaaacacgatc
gaactacccaaattcaccaaaggcgaaacattccagcctacagaagcaatgatgaccgag
ggcaagacctcaccacctaactatctcacagaggctgatctgattgcattaatggacgcc
aacgggatagggacagatgcaacaatggcagagcacattcagaaaatccaagatagagag
tacgttgctactattgaacgaagcggtgcaacagcaggagacgacgctgatggcacgcaa
gatgagatattgtcgtcgtccagaggtggtagaggaagaggcaggggacgtggaggaagg
ggccgtgggaattcaacattatctaatggcagaagaggtggtatccgtgtctttgtccca
acacagctgggagtcgccctgatcttagggtacgaccggatgaatttcgaaaccagtctt
ggtaaaccgtttctgcgcaaggaaatggagctcaagatgaaggcaatttgcgaaggtcga
acaacaagagcggtcgtcctccgtgaaagcataacccaataccggcaagtctttatgcag
acgcaagagaagctagatgttcttcgtgccgcttgtcgcgaattcgtgtttgctcagcca
gctctggatcagtcatgctgtgatcctactaccgatcccgaggtgcgccaaatagataca
ggcaacccacgcaaccgaagacgaaaatgcttggacctctacccaagcctggattgggct
cagtctgacaatggcctcggcaacgcttga
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