Pochonia chlamydosporia: VFPPC_02755
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Entry
VFPPC_02755 CDS
T09407
Name
(RefSeq) DNA repair helicase RAD25
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03022
Basal transcription factors
pchm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
VFPPC_02755
09124 Replication and repair
03420 Nucleotide excision repair
VFPPC_02755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_02755
03400 DNA repair and recombination proteins [BR:
pchm03400
]
VFPPC_02755
Enzymes [BR:
pchm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VFPPC_02755
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
VFPPC_02755
DNA repair and recombination proteins [BR:
pchm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
VFPPC_02755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
Biotin_lipoyl_2
Motif
Other DBs
NCBI-GeneID:
28846348
NCBI-ProteinID:
XP_018146788
UniProt:
A0A179FYQ3
LinkDB
All DBs
Position
2:complement(2067917..2070400)
Genome browser
AA seq
827 aa
AA seq
DB search
MPPKRKAEAAVQSGAKAGRSSRMSTPGAATPRSLDSNEELEEDDGPVDEVLERDIDKNID
LFSLDRFQKRHAIREPLPHIFGDRDFSYLDLKKDHQNRPLWIDPQKGRIILESFNPLAEQ
AQDFLITIAEPLSRPTFMHEYALTTHSLYAAVSVGLSPSDIINTLERFLKTPLPDEIRSF
ITSCTQSYGKVKLVLKNTKYYVESPDPEMLQMLLKNPTIGPLRVQGTEEITTSAAPKIGA
LVIPGTKNAAGVKQANGLSQGGEQQNGQAVNEGDVLATLNEEDDEDQEVTHSFEIADKDV
ETVQKECLSLGYPVLEEYDFRRDEVNSNLEIDLKPGTQIRPYQEKSLSKMFGNGRAKSGL
IVLPCGAGKTLVGITAACTIKKGVIVLCTSSMSVVQWRNEFLKWSNINPDDIVAFTSDSK
GSVFTGSTGIIVTTYSMVTQSRARSYDADKMMKFLTGREWGLMLLDEVHVVPANIFRKVT
SSIKTHSKLGLTATLLREDDKISDLNFLIGPKLFEANWMELSKQGHIARVQCAEVWCPMP
TEFYDEYLRAPSRKKNLLYIMNPRKFQACQYLINYHEARGDKIIVFSDNVYALKAYALKL
GKAFIYGGTGQPERLKVLENFQHNPLVNTLFLSKIGDTSLDLPEATCLIQISSHYGSRRQ
EAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYFSSKRQAFLVDQGYAFKVITQLANI
EKTPGLAFATAGERRELLQKVLVENESMEDEDITDDLFHSGTMGRKKKKGARRTAGTLGE
LSGGQDMAYIEQNKRVNQGLKKGKGKKESNAFFKKIGRENARRAAAQ
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgccaccaaaaagaaaggcagaggcagccgtgcaaagcggcgcgaaggctgggaggtct
tcgcgcatgtctactcctggtgcggcaacacctcgaagtctggatagcaacgaagagttg
gaggaggatgacgggccagtcgacgaagttctcgagcgtgacatcgacaaaaacatcgac
ttattctccctagatcgcttccagaagagacatgcgattcgggaaccgcttccgcatatt
tttggtgaccgtgacttctcgtacctggatctaaagaaggaccaccagaatcgtcccctc
tggatcgacccccagaaaggcagaatcatcctggagagtttcaaccctcttgcagaacag
gcgcaggattttctcatcacgattgctgagccgctctctcgaccgacctttatgcacgag
tatgccttgacgacgcatagtttgtacgccgccgtatccgtgggcttgtctccctccgac
atcatcaatacattggaacgctttctcaaaacgcctcttccggatgagattcgatcattc
atcactagttgcactcagagctacggaaaggtgaagctcgttttgaagaataccaaatac
tatgtcgaaagcccggatcctgaaatgctccaaatgctgctcaagaaccctacgattggt
ccgcttcgagttcagggtactgaggaaattaccacatctgccgctccaaagattggcgct
ttggtcattccaggcaccaagaatgctgccggcgttaaacaggctaatggcctatctcaa
ggtggcgagcagcagaatggtcaggcagtcaacgaaggcgatgtcttggcaaccctcaac
gaagaagatgacgaagaccaagaggttacgcactcgtttgagattgctgacaaggatgta
gaaactgtccaaaaggaatgcttgagccttggataccccgtgttagaggaatacgatttc
cgtagagacgaggtcaactcaaatctggagattgacctcaagcctggcacccaaattcgg
ccgtatcaagaaaagagtctaagcaagatgtttggcaatggccgagcaaagagtggactg
attgtcttgccttgtggtgccggcaagacacttgtcggtatcaccgctgcctgcaccatc
aagaagggagtcatcgttctttgcactagctctatgtcagtcgttcagtggaggaatgaa
ttcttgaagtggtcaaacatcaaccccgacgatattgttgcatttacgtccgattccaaa
ggatccgtcttcactgggagtacaggtattatcgttacaacttactccatggtgacacag
tcgcgagcccgatcatacgatgccgataaaatgatgaagtttctcactgggcgagaatgg
ggtcttatgctcttggatgaggtgcacgtcgtccctgccaacatctttcgaaaagtcacg
tcttcgataaagactcattctaagcttggtctcactgccactcttcttcgagaagatgac
aagatttctgatttgaactttttgattggaccgaagctctttgaggcaaattggatggag
ctgtccaaacagggacatattgccagagtgcagtgtgcagaagtgtggtgtcccatgcct
accgagttttacgacgaatatctacgggcgccatccaggaagaagaacttgctgtacata
atgaatcctcgcaagtttcaggcctgtcaatatctcatcaactatcatgaggctagaggg
gacaagatcattgtcttctcagacaatgtgtatgctctgaaagcgtatgctctaaagcta
ggcaaagcattcatctatggaggcactgggcaacccgagcgtttgaaggtcttggagaac
ttccagcacaaccccctcgtcaacacattgtttctctccaagattggcgatacgtcactt
gatttgccagaagctacttgtctcattcaaatttcgtctcattatggctctcgacgtcaa
gaggctcaacgactgggccgtatcttgcgagccaaacgacgaaatgacgagggtttcaat
gcgttcttttactccttggtctcaaaggacacacaagagatgtacttttcatccaaacgc
caagcgtttctggtagatcagggctatgctttcaaggtcattacccagctggccaatata
gaaaagaccccaggattggcatttgccactgccggcgaacgacgagagttgctgcaaaaa
gtcttagtggagaatgagtcgatggaagacgaagacatcacagacgatcttttccacagt
ggcaccatgggccgcaaaaagaagaagggtgcccgcaggacagcgggcacgctaggcgaa
ctaagtggtggtcaggatatggcgtatattgagcagaataagagagtgaatcagggactc
aagaagggcaagggtaagaaagagagcaatgcgttcttcaaaaagattggacgagagaat
gctagacgggcagctgctcagtaa
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