Pochonia chlamydosporia: VFPPC_02816
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Entry
VFPPC_02816 CDS
T09407
Name
(RefSeq) TBP associated factor
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_02816
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
VFPPC_02816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_2
TOR1L1_N
ResIII
HEAT_EF3_N
HEAT_ECM29
Motif
Other DBs
NCBI-GeneID:
28846398
NCBI-ProteinID:
XP_018146869
UniProt:
A0A179FXH7
LinkDB
All DBs
Position
2:complement(2299218..2304899)
Genome browser
AA seq
1893 aa
AA seq
DB search
MASRLDRLVTILETGSTRLIRETAVNQLADWQKQHPDELFNLLSRVVPYLRHKDWETRST
AAKAIGKIVENAPLYDPNEEDALPAPKKEEDTGENGHIKKEEGDKDTLLTEDDLLKFESL
NVHSILNYGRELLRGGGIEYNLAALDPQARLEHQKKTLLGRLGLLGRKFEDEEMPVVADS
QAVPMTPIEGSNGNGITRSDSISQSQGGEDSQLSSRQLNVLKRKRKREAMKASQGKGGFG
DLSLRRSTTAGSEGLGADETPMAEGESKKNGKMNDYFNLDRPSDVDEGTKVVSEFKGPVI
PIKSELEAEDTMEGAEWPYERLCDFLKIDLFDPSWETRHGAAMGLREVIRVHGGGAGRIR
GKGMEDNESLNKKWLDDLACRLCSVLMLDRFTDYSSDTSVAPIRETIGQTLGSALKHIPS
TSVYDIYRILYRMVMQEDLELERPVWAVCHGGMVGLRYVVAVRKDLLLQDGDMIDGIIKA
VMKGLGDMDDDVRSVSAATLIPMAKEFVTMRPDQLDGLTSIVWESLSNLGDDLSASTGRI
MDLLATLCGFPEVLEAMKASAAQDEERSFTLLVPRLYPFLRHTITSVRLAVLKALLTFAN
LGDDTSHGWLNGRILRLIFQNILVERDVETLNMSLELWNALVGTLAKNPAVLADEFAPHI
DPLMELTLHPIGVSRNPIPMNATLFQKPSGGTYSAQGMGPPSGRRLSSPDGADRAPKRRR
KSTKAEEPVSTGMTHDVDGHMMQGDVDLVGMDVLIRSRVSAASAMGKIMSLVPSSNLDDY
DALLVPGLTSAFSSTQLTACLVVDEFAKSCATADEPARYTEQLQRIVELERPSSYRDLVN
FVQRARTQCQQLIHLFRDHGKVSHGKLPVLPVVVQGEPEAGPSAFSIATAEKCVGDDFER
LKKIMPPGQRLIASQQLAEARNVAVAAIGEAKAFKDARDTRIKAGAACAMVAMKLLPKKP
SPLIKGIMDSVKTEENQLLQNRSSATIARLVQLFAEKGRKGPADKVVANLVKFSCVEVAE
TPEFPVHAAKTSCILSMQKEEDRVDHPDAAKWAKEAKAARITRRGAKEALEILSKAYGAT
LLETVPSLRSFMEEPMVRAFSGDLPTEAKDPENVFGQEIVDAMSVIRTMTPTLDVALRPF
VMKMLPLVIKALHSELSVFRYMAAKCLATICSVITVEGMTALVEKVLPSITNPLDLNFRQ
GVTEAIYHLIAVMGDAILPYVIFLIVPVLGRMSDSDNEIRLIATTSFATLVKLVPLEAGI
PDPPGLSEELLKGRDRERTFIAQLLDPKKVEQFQIPVAIKAELRSYQQEGVNWLHFLNKY
HLHGILCDDMGLGKTLQTICIVASDHHQRQEEFAKTGAADVRRLPSLIVCPPTLSGHWQQ
EIKTYAPFLTVTAYVGPPAERKTMRDKLGETDIVVTSYDVCRNDTDILDKHSWNYVVLDE
GHLIKNPKAKITQAVKRLASNHRLILTGTPIQNNVLELWSLFDFLMPGFLGAEKVFLDRF
AKPIAASRFSKASSKEQEAGALAIEALHKQVLPFLLRRLKEEVLNDLPPKILQNYYCDLS
DLQKKLFEDFTKKQGKKLQAEAGRDDKEAKQHIFQALQYMRKLCNSPAMVMKPGSPTYDD
TQKILQKQGTSIEDTIHAPKLTALKDLLVDCGIGGDDGDTNDPLYQPIKPHRALIFCQMK
EMLDMVEKKVLRELLPSVSHLRLDGSVEANKRQDIVNKFNSDPSYDVLLLTTSVGGLGLN
LTGADTVIFVEHDWNPQKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKILSLQRFKIDV
ASTVVNQQNAGLSTMDTDQILDLFNLGDSGPNLITDKPQKEVDGREEDMVDIETGDVLRQ
PGKKAWLDDLGELWDNKQYEESFDLDDFMKTMS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggcatccagactggacaggctggtgactatcctcgaaacgggaagcaccagactgata
cgagaaaccgctgtcaaccagcttgcagattggcaaaaacaacaccccgatgaactgttt
aacctcttgtcccgcgttgttccctacctgcgtcacaaggattgggaaacccgcagcacc
gcagccaaggctatcggcaaaatcgttgaaaatgcccctctctatgaccccaatgaggaa
gatgctcttccagcgccaaagaaggaagaggatactggcgagaatggccacatcaagaaa
gaagagggcgataaggatactctcctcaccgaagatgacctactcaagtttgagtccctt
aatgttcactcaatattaaattacgggagagaactgctccgtggcggtggtatcgaatac
aacttagctgcacttgatccccaagcgagactagagcatcagaagaaaactctactaggc
cgacttggcttgttgggacgcaaatttgaggacgaggagatgcctgttgtcgccgacagt
caggctgtgcccatgacccccatcgaaggtagcaatgggaatggaattactcgaagcgac
agcatatctcagagtcaaggtggagaggactcacaactcagctcaagacaactcaatgta
ctgaaacgaaaacgaaagagagaggcgatgaaggcctctcaaggtaaaggagggtttggc
gacctttcgctgcgacgctctaccactgccggatctgagggtctaggcgctgacgaaact
cccatggcagaaggagaatccaagaagaatggcaagatgaatgactattttaacctcgac
cggccctccgatgtcgacgaaggaaccaaagttgttagcgaatttaagggccctgtcata
cctatcaaatcggaactggaggcggaagataccatggaaggtgctgagtggccatatgaa
cgactgtgtgactttctcaagatcgacctgttcgatccgtcgtgggaaacccgtcatggc
gcggcaatgggcctgagagaagtcatcagggtccatggtggaggcgctggaagaatacgt
gggaagggcatggaggataatgaatccctgaataagaagtggttggatgaccttgcctgc
cggctttgctctgtattgatgttggatcgatttaccgattacagttcagacacctcggtg
gcgcctataagggagaccataggccagacacttggttcagccttgaagcacattccttcc
acctcggtttatgacatttaccggatcttatatcgcatggtgatgcaggaggacctcgaa
ttagagcgcccggtctgggctgtgtgccatggtggcatggtcggactccgatacgtcgtt
gctgtgagaaaggacctccttttgcaggatggcgacatgatcgatggcatcatcaaggca
gttatgaagggtctgggtgatatggacgacgatgtgagatccgtgagcgctgcaaccctt
attcctatggcaaaggaatttgtcacgatgcgcccggatcagctggatggattgacaagt
attgtttgggagagtctttccaatcttggcgacgatctcagcgcaagcactgggcgcatc
atggaccttctcgccaccttgtgtggcttcccggaagtcctagaggctatgaaggcatcc
gcagcacaggatgaggagagatccttcactctgctcgtgccacgtttgtaccccttcctc
cgtcataccatcacgtctgtgcgtctcgccgtattgaaggccttgcttacgtttgccaac
cttggcgatgatacttcacacggctggcttaatggccgaattcttcgactcattttccaa
aacatcctcgtcgaaagggatgtagagacacttaacatgtcgttggagttgtggaatgcc
ctggtcggcaccttggcgaagaacccagccgttctcgcagacgagtttgcacctcacatt
gaccccctcatggaacttacgctacacccgatcggcgtctcgcgaaatcctatcccgatg
aatgcaactctcttccaaaaaccttcaggtggaacctactcggcacagggcatgggtccc
ccatccggtcgacgactgtcctctcccgatggtgcagatagagcgcctaagcgacgtcgc
aagtctaccaaagctgaagagcccgtgtcgacaggaatgactcacgatgtcgatggccat
atgatgcaaggtgacgttgacttggtaggcatggacgtgctaattcgatctcgggtgtca
gcagccagtgccatgggcaaaatcatgtcccttgtaccatcgtcaaatctcgatgattac
gatgccctgctggtgcctggtttgacttctgccttctcttccacgcagcttactgcctgc
ttggttgtggatgaatttgccaagagctgtgcaaccgcagacgaacctgctcgatacact
gaacagctgcagcgcatagtcgagctcgaaagaccttcatcatatagagatttggtcaat
tttgtgcaacgcgccagaacccaatgccagcagctcatccacctgttccgtgatcatggt
aaagtatcgcacggcaagcttccagttcttccagtcgtcgttcaaggcgagccagaagca
ggaccaagtgccttttcaattgccacagcagaaaagtgtgtcggggatgatttcgagagg
ctcaagaagataatgcctcctggacagcgcctaatagctagccagcagctggctgaggct
agaaatgtcgcagtagcggccattggggaagccaaagcgttcaaagacgcgcgtgatacc
aggatcaaagccggcgctgcttgtgccatggttgcaatgaagctgcttcctaagaagcca
agcccgttgatcaaaggtatcatggactcggtcaaaaccgaagagaaccagctcctccaa
aaccggtcatcggcaactattgcgaggcttgtacagctcttcgctgaaaagggccggaag
gggcctgctgataaagttgtcgccaatcttgtcaagttctcctgtgtggaggttgccgag
acgccagaattccctgttcatgccgccaagacctcctgcatcctctccatgcaaaaggag
gaagatagagtcgatcaccctgatgctgccaagtgggccaaggaagctaaagctgctaga
attacacgacgcggtgccaaggaggctcttgagattttgtcaaaagcgtacggggcaacc
ttgctggaaacagttccaagtcttcgaagcttcatggaagagcccatggtcagggccttc
tccggcgacctcccgacagaagccaaggaccctgagaatgtctttggccaagagatcgtc
gatgccatgtccgtcatccgaacgatgactccaactctggacgttgccctgcgtcctttc
gtcatgaaaatgttgccccttgttatcaaggcacttcactcggagctctcggtgttccgg
tacatggcagccaagtgtcttgccacaatctgcagtgtaattacggtggaaggcatgact
gctctcgttgaaaaggttctcccgtcaattaccaatcccttggatctgaacttccgccag
ggcgtcactgaggccatctaccacttgatcgcagtcatgggtgacgccatcttgccatat
gttatcttcctcattgtacccgttcttggccgaatgagcgactccgacaacgagattcga
cttatcgcaacaacgtcgtttgcaactttggtgaagcttgttccgctggaagcgggcatt
cctgacccccctggcctgtctgaagaactcctcaagggccgagaccgggagcgaactttt
attgcacaacttttggacccgaagaaagttgagcagttccagatacccgttgccatcaag
gccgaactgcggtcctaccagcaagaaggcgtaaactggctccacttcctcaacaaatat
caccttcatggcattctttgtgacgacatgggcttgggcaagacactccaaaccatttgc
attgtagcaagcgaccatcaccaacggcaagaggaattcgccaagacgggcgctgccgac
gttagacggctaccatccctcattgtctgtcccccaacactttctggacattggcaacaa
gaaatcaagacgtatgcgccgttccttactgttacggcctatgtaggaccgccggccgag
cgcaaaacgatgagagataaactgggggagaccgacatcgtggtaacgtcgtacgacgtc
tgcaggaatgacacggatattctggacaagcacagctggaactatgtggttcttgacgag
ggccatttgatcaagaatcccaaggccaagattactcaggctgtcaagaggcttgccagc
aaccaccgcctcatcctgacgggcacgccaattcagaacaatgtcttggagctctggtcc
ctgttcgacttcctcatgccaggtttcctcggggccgagaaggtgttcctggatcgattc
gccaagcccatcgcggcaagccgtttcagcaaggcctcctcaaaggaacaggaagcggga
gcattggcaattgaagctttacacaagcaagtgctaccattcttgctgcgtcggttgaag
gaagaggtgttgaatgacctgccgccgaagatccttcaaaattactactgtgacctaagc
gacctgcagaagaagttatttgaagacttcaccaagaagcaaggcaagaagctgcaggct
gaggccggtcgtgacgacaaggaggcaaagcagcacattttccaagctctgcagtacatg
cggaagttatgcaattcaccggcgatggttatgaagccaggcagccctacctacgacgat
acgcagaagatcttgcagaagcaaggaacgtcgattgaggacacaatccacgcacctaaa
ctcactgccttgaaggaccttttggttgactgtggcattggtggggatgacggggatact
aatgatcccctgtatcagcccatcaagccacacagagcacttattttctgtcagatgaag
gaaatgctggacatggtggagaagaaggttctgagagagctcttaccgtcggtttctcac
cttcgattggatggatctgttgaggcgaataagagacaggatattgtcaacaagtttaac
agtgatccatcatacgatgtgttacttttgacaactagtgtcggtggcctcggtctcaat
cttacgggtgctgataccgtcattttcgtggaacatgactggaacccgcaaaaagatttg
caggctatggaccgagcacacagaattggacagaagaaggtggtcaacgtgtaccgactg
attactcgtggcacgttggaagagaagattctcagtctccaacgattcaagattgatgta
gcatcgaccgtggtcaatcagcaaaacgcggggctgtcaacgatggatacagaccagatt
cttgatctattcaacctaggtgactcgggaccaaacctgataacggataagccgcaaaag
gaagtggacggacgagaagaggacatggtggatattgagactggcgatgtactgcgccag
ccaggtaaaaaggcttggctggatgacctaggggaactatgggacaataagcagtacgaa
gagagctttgacctggatgatttcatgaagaccatgtcatga
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