Pochonia chlamydosporia: VFPPC_02893
Help
Entry
VFPPC_02893 CDS
T09407
Name
(RefSeq) SWI-SNF complex subunit
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03082
ATP-dependent chromatin remodeling
pchm03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
VFPPC_02893
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
VFPPC_02893
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pchm01009
]
VFPPC_02893
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_02893
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_02893
Protein phosphatases and associated proteins [BR:
pchm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
VFPPC_02893
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
VFPPC_02893
SWI/SNF complex
VFPPC_02893
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
VFPPC_02893
PBAF complex
VFPPC_02893
SWI/SNF complex
VFPPC_02893
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
TH_ACT
Motif
Other DBs
NCBI-GeneID:
28846466
NCBI-ProteinID:
XP_022284573
UniProt:
A0A179FYF3
LinkDB
All DBs
Position
2:2555753..2558009
Genome browser
AA seq
723 aa
AA seq
DB search
MATQPATSAPATGVTPTATSATSAPPGDEKDASQTSAPSEIPVRTKESFNKLMVERYTMR
DSIASAALGEQLNQTRQSSQEMREKIHEYRMVRNEYKPWFPPSRLYGEGYNGFGNGYTEN
QQPASRIVYPAQKPRPGRRTTPSFKFARKDMLKQAEQHEELVPLRLEVEWDKVKLRDTFT
WNLHERLLAVELFAAQLVEDMGLKPPAAQPVFDQIVLQMREQLNDFYPFAFAEEDALDPE
LPYSAYKNDEMRILIKLNITIGQHTLVDQFEWEINNPHNSPEEFAANMARDLSLSGEFTT
AIAHCIREQAQLFTKSLYSIGHPFDGRPVEDSDLVSAFLQTPLPTVFRPQQQAKEYAPYM
YELSEADLERNEMVFSREQRRQKRSINRRGGPQLPDLRERQRTIRTLIVSSVLPGAAENV
EDSRLYKRTAGANRKRTARDGEISESEESEDSSPDSPAPSQMAGTARTRGMRGAASAAQQ
RMANLGRSETPETGSLHHHETRTSRRGREETEEPSHLWVTLKVHKDKLRRLMKGDYRDLK
TPSQPQTPVVAHARAPSTSSVPKPKTPFTPTSASSTPQPAAAPAPSGSGSSSFPAGQLGR
LPAPPPVPGQSPPPAPPPPEWLVNALKDLEKQYPNGDKFEAIMKYSYLDPVTELPVQPQS
QPFPEGVKYAWLPRIRCLDCATKLYTPGPDMTAQKFEAHLKFSGHQKKVQQRLAAQNTGA
PSS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaaccagccacgtcggcgccggcgacaggcgtgacgccgaccgcgacgtct
gcgacgtctgcaccacctggtgatgaaaaagatgcttcgcagacatcggcaccgtccgag
atacccgtaaggaccaaggaatcgttcaacaaactcatggtcgagcgttacacgatgcgc
gactccattgccagtgccgccctgggtgaacagctcaaccagacacgacaatcctcacag
gagatgcgtgagaagatacacgaatacaggatggttcgcaacgagtataagccttggttc
ccgccgagtaggctctacggcgaagggtacaatggatttgggaacggatacacggaaaac
cagcagcctgcgtctcgaattgtctacccagcgcaaaagccgcgacccgggcgacgaaca
acgccttccttcaagtttgctcgcaaggacatgctgaagcaggctgaacaacacgaagag
ctcgtcccgctgcgtctcgaggtggagtgggataaggtcaagcttcgcgacacgttcacc
tggaacctgcacgaacgactgctggctgttgagctgttcgctgcgcagctggtggaggac
atgggactgaagcctcctgctgcacagccggtatttgatcaaattgttctgcagatgcgg
gaacagctcaacgatttctatccctttgcgttcgcggaggaagacgccctggacccagaa
cttccgtactcagcttataagaatgacgaaatgcggatcctaatcaagctaaacatcacc
attggccagcatacattggtagatcagttcgaatgggagatcaacaaccctcataactcg
ccggaagaatttgccgccaacatggctcgcgacctttctttatcgggcgagttcacgacg
gcaattgctcactgcattcgcgagcaggcccagcttttcaccaagagtttatacagcata
ggacatccctttgacggcagaccggtcgaggactcggatcttgtgtctgcgttcttgcaa
acaccgctccctaccgtcttccgaccacagcagcaagctaaggaatacgcaccatacatg
tatgagctcagtgaagcggacctggagcgaaacgagatggtattttctcgcgaacagcgg
cgtcagaaacgatccatcaaccgacgcggtggaccacagctccccgatctcagagaacga
caaaggacgattcgcactctcattgtgtcgtctgtcctgcctggtgccgccgagaatgtc
gaagacagccgattgtacaagcggacggcgggagcaaacagaaagagaacggctcgcgat
ggtgaaatttcagagtccgaggagagcgaggactcatcgcccgactcgcctgcaccctca
caaatggccggtacggcacgcacaaggggtatgcgaggagcggcatcggcggcacagcag
aggatggctaatcttggccgctctgaaacacccgagactggctcactacaccaccacgag
accaggacgtcgcgtcgcggccgggaagagacagaagagccttctcacctatgggttacg
ttgaaggtacacaaggacaagctcagacgactgatgaagggcgactatcgcgacttaaag
acaccttcgcaaccccaaacgccggtggtggcccatgctagagcgccaagcacatcaagc
gtaccgaaacccaaaacgccattcacaccaacttctgcatcctccacgcctcaaccagca
gctgcaccagcaccttcaggaagtggctccagctcctttcccgcaggccagctaggacgt
ctccctgctcctcctcctgtccctggacaatcacctcccccagctccccctccaccagag
tggctcgtcaacgccctcaaagacctagagaagcaataccccaacggagacaaatttgaa
gccatcatgaaatactcctacctcgatcccgtcaccgaactccccgtccagccgcaatca
cagccattcccagaaggcgttaagtacgcctggctcccacgcatccggtgtctcgactgc
gctacgaagctgtacacccccggcccagacatgactgcccaaaagttcgaagcgcatcta
aagttctcagggcaccaaaagaaggtccagcaacgattggcggcgcaaaataccggtgca
ccgagttcgtag
DBGET
integrated database retrieval system
