Pochonia chlamydosporia: VFPPC_02899
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Entry
VFPPC_02899 CDS
T09407
Name
(RefSeq) RNA polymerase-associated protein CTR9
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pchm03021
]
VFPPC_02899
Transcription machinery [BR:
pchm03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
VFPPC_02899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_12
TPR_19
TPR_14
TPR_16
TPR_7
TPR_CcmH_CycH
TPR_6
TPR_17
ARM_TT21_2nd
ARM_TT21_N
ANAPC3
Motif
Other DBs
NCBI-GeneID:
28846472
NCBI-ProteinID:
XP_018146960
UniProt:
A0A179FZE1
LinkDB
All DBs
Position
2:<2576524..>2580122
Genome browser
AA seq
1178 aa
AA seq
DB search
MATVANGTTNGVTNGDRPAGPVSTRFSDIPSAIDIPVQGDQEDEAVEIDLEDLLDDPTEL
CTLFENERAAKTYWMTVALAYAKQKKIDHAIEMLIRGSGSIQSNSSNPRDKVSMICCLCW
MYLWKSREAPRVAPDGVRVSEAKTKEYYLQLATSSLNDAARLNPSFPPIFLARGVLLLLR
ASLQAPSKTAGGIGSEKNELLKTAVKSFDDALRVSQGKNMLALMGKARAYFSMHKYPDAL
ATYQDVLQKMPDLVDPDPRIGIGCCFWQLGFKEDAKVAWERSMEINPESKIANILLGLFY
LDASGHVPVNSDEFLKLYRRAMTEYTQKSFKLDKEVPITCSTFAGYFLSRKAWDNADKLA
HKAIQYTDVNAIASDGWYLLARKAHYAGDTEKASDYYRRADDARGGADTGYLPAKFGVAQ
LSVLKQDLGEAKLRLEKMIQQSKNHEAMILLGTLYAEEIFASQKSDSKEDKSAEMKKAIT
LLEGVRNAWKDPKRTIAPDASVLLNLARLYELDQPEKALQCLQQVEQLEMDQIPESERPV
DTEDEANAQAELRKLLPPQLLNNIGCFHSQAEKHELASEMFEAALSACMRIGEKEPSMDT
DALVSSISFNLGRSYESRGLTDKAIEVYDGLLARHDDYTDARTRLAYIKLRKNPNKEGPD
AVAKLYQENTSDLEVRALYGWYLGKVHSRKRPANIAEDPEFRHYKHTLQNYDKHDRYALI
GMGNLYLLQAREMRRETDSDKQKRSVIYGKAVEFFEKALSLDPKNAYAAQGVAIALVEDK
KDYKTALAIFNKVRETVRESHVYVNLGHVFAELRQYSKAIEHYEIALTKDGKTNDPVILS
CLGRTWLNRGRTEKDIDAYSKALECAQKALEAAPDQVHYKFNVAFVQIQLVTTIQNLPEN
RRSSEQLETAAAGLEAAIESLDTIATLPQTPYPKHDIEQRANMARNTLRKQLERAIAKQK
EWEEKNKEKIQAAKEQREAELKRREQQRQLVLEKERERQDKIRKEREAIAARDRALAEQR
AEEERQKAEAELTTDSETGEKVKRKRKPAPRASGEGKTKKTPKKKKADRDEDDSEEESHT
KKRRRLTKKESSKFKSAEIVVDSDEDDDDDDALERAERDMEREGTPASEGDDDAVEKMDV
DEEDQPAHSGGEDEDDAGPRSKRSRRGRVVEESEEEEE
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgttgccaatggaacgacaaatggtgtgaccaacggcgatcgaccagccggc
ccggtcagtactcgattctcagacatcccgtccgccattgatattcccgtgcaaggagac
caagaagatgaagccgtcgaaatcgatctcgaagacctcttggatgaccctaccgagctt
tgcactcttttcgagaacgagcgagccgcgaaaacgtattggatgactgttgcgctggcg
tatgcgaaacagaaaaagattgaccatgccatcgaaatgctcatccgaggcagcggctcc
atccagagcaacagcagcaacccgcgcgataaagtcagcatgatttgctgcttgtgctgg
atgtacctatggaagagtcgtgaagcaccgcgtgttgcgccagatggcgtacgagtctcc
gaggccaagacgaaagaatattacctccagctggctacctcgtcgttgaacgacgcagcc
cggctgaacccatcgtttccgcctatttttcttgcccgtggtgttctgttactgttgcgc
gcatcacttcaggccccttccaagacggcaggaggaataggctctgagaagaacgaactg
cttaagacggcagtcaagtcttttgacgatgcgctccgagtctcgcaaggcaaaaatatg
ctggcccttatgggcaaggcaagagcatacttctccatgcacaagtatccagatgctttg
gcgacatatcaggatgttttgcaaaagatgcccgatctggttgaccctgatccacgaatt
ggcattgggtgttgcttttggcaactgggattcaaggaggatgccaaggtggcatgggaa
cgaagtatggagatcaaccccgaatcgaaaattgccaacatcttactcggcctcttctat
ctcgacgccagcggtcatgttccggtcaacagcgacgaattcttgaaactctacaggcga
gccatgacggaatacactcagaaatcgttcaagctggataaagaggttcccatcacttgc
tctacctttgctggttactttttgtctcgcaaggcatgggacaacgccgacaaactggcg
cacaaggccattcaatataccgacgtcaacgccattgctagtgatgggtggtatctgctg
gctagaaaggctcactatgctggggatacggaaaaggccagcgactattatcgtcgtgca
gatgatgctcgtggaggtgcagatacgggctacctcccggccaagtttggtgtggctcag
ctgtctgtgttgaagcaagatttaggcgaagctaagcttcgtctggagaagatgattcaa
cagtccaagaaccacgaggccatgattctgttgggaacgctctacgcagaagagatattt
gctagccagaagagtgacagtaaagaggacaaatctgcagagatgaagaaggccatcact
ctcttggaaggcgttcgcaacgcgtggaaggacccgaagcgtacgattgcccccgacgcc
tctgttctcctcaatctggctcggttatatgaactggatcaacctgagaaggcattgcag
tgtcttcagcaggttgaacagcttgagatggaccaaattccagagtcagagcgtcccgta
gacacagaagacgaagcaaatgcacaagcagaattgaggaagcttctccctccccagctt
ctgaacaatattggctgcttccattctcaagccgagaagcacgagttggccagtgagatg
ttcgaggccgcactcagcgcatgcatgcgaattggcgaaaaggaacccagcatggatacg
gatgctttggtttcgtcaattagcttcaacctcggtaggagctacgaatcaaggggtttg
acggacaaggcaatcgaggtttatgacggcctgttggctcgtcatgacgactacaccgac
gcgcgtactagattggcgtatatcaaactgcggaagaaccctaataaggaaggaccagat
gcagtcgccaagctgtaccaggagaacactagtgacttggaagttcgagctctatatggt
tggtaccttggcaaggtacattccagaaaacggccggcaaacattgcagaggaccctgaa
tttcgccactacaagcacacattgcaaaattatgacaagcatgatcggtatgctctcatt
ggcatgggcaacttatacttgctgcaggccagagagatgcgtcgtgagacggattcagat
aagcagaagcgaagcgtcatctatggcaaggccgtggagtttttcgaaaaggccctttca
ctagatcccaagaatgcctatgcggctcaaggtgtggctattgctctggtggaagacaaa
aaggactacaagacagccctcgcaatcttcaataaggttcgagaaacagtgagggagtcc
catgtctatgtcaacctggggcacgtctttgcggaattaaggcaatactcgaaggcaatt
gagcactacgaaattgctctcaccaaggatggcaaaaccaacgacccggttatcttgtct
tgtctggggcgtacgtggctgaatagaggtcgcacggagaaggacattgatgcctacagt
aaagccctcgagtgtgcccaaaaggccctggaagccgcaccggaccaagtacattacaaa
ttcaacgtggcctttgtgcaaatccagctggttaccacgattcaaaacctacctgagaat
agaagaagctccgagcagctagagacggccgccgcgggtctcgaggccgcaatcgaatcc
ctcgacaccattgccacccttccccaaactccctaccccaagcacgacatcgaacaacgt
gcaaacatggcacgtaacaccctccgcaaacagctcgagcgagccattgccaagcaaaag
gagtgggaagagaagaacaaagagaagatccaagcggccaaggagcagcgtgaggccgaa
ctcaagcgtcgcgagcaacaacgccaattggtcctcgagaaggagcgcgagcgtcaagac
aagatccgcaaggaacgagaagccatcgccgcccgagaccgagccctcgccgagcaacgt
gctgaagaagagcgccaaaaggcagaggcggaattgaccaccgactccgagacaggtgaa
aaggtcaagcggaagcgtaagcccgcgccgcgcgcatccggcgaaggaaagaccaagaag
acacccaagaagaagaaggcggaccgtgacgaggacgactcagaagaagagtcgcatacc
aagaaacgacgacgtcttaccaagaaggagtcatctaaattcaaatctgcagagattgtt
gtcgacagtgatgaagatgatgacgacgacgacgccttggaacgagcggagcgagacatg
gagcgcgaagggacgcccgcgtcggaaggagatgacgatgcggttgagaagatggacgtt
gatgaggaggaccagcctgctcatagtggtggcgaagatgaagacgatgctggtccacgg
tctaagcgttcgagaaggggacgggttgtggaggaaagcgaggaggaggaagagtag
DBGET
integrated database retrieval system
