Pochonia chlamydosporia: VFPPC_03005
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Entry
VFPPC_03005 CDS
T09407
Name
(RefSeq) nucleoporin, NSP1-lik
KO
K14306
nuclear pore complex protein Nup62
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
VFPPC_03005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pchm03019
]
VFPPC_03005
Messenger RNA biogenesis [BR:
pchm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
VFPPC_03005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
SLATT_fungal
ATG17_like
PI_PP_I
Motif
Other DBs
NCBI-GeneID:
28846558
NCBI-ProteinID:
XP_018147091
UniProt:
A0A179FY38
LinkDB
All DBs
Position
2:complement(2969564..2971789)
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AA seq
722 aa
AA seq
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MSFTFGTQGSSSAPSNNPTTTAPATGGLFGGASSGGTPSFSFGSAGGSTGGNNATSNSAG
SIFGQKSAGDAQKPAGGLFGGAPSSNTASTPTSGGLFGGASTTPSTSGLFGGANNASSTP
TSAAPSSGGFFGGAGGASSTTPASGGLFGGSNTSSSKPASSGMFGGGGGSSSGGGLFGAQ
SSGAQSQSTTTTSAAPSSGLFAQSGSGLFGNKTGTTPTTNPQSTTPTTASAATPAKPMFS
LPSTTPAGAPPIDSSKSAATTGTTAGGLFGGAAKSAAPSTSAPAAPATSGLFGGAQSGAG
SSAGGLFGNKPAATTGGSAGGLFGAATSNSTPATSATSGSATATTGSAGSMFGAKPAAST
ASAAPASTTTSSGLFGGGATSSATTSSAAPATASTAGGLFGNKPAATTTASATPAATATA
GGLFGGGTQAASTAAAAKPASSLFGGAAPASTGATPAPAASTAGGLFGAKPATDAASKDK
EEPKPAAQNGTTNALGASTTGPTSQMARLKNKTMEDIVTRWASDLTKYQKEFKEQATTVS
TWDRSLVDNGEKIQKLYLDTFEAERASHEIERQLATVESQQEELEAWLNRYETEVQDMFA
KQIGPGEQLAGPDQERERTYKLAEKLTQQLDEKSRDLSKMVKEINDISGTLSKGAKTEDP
LSQIVRVLNSHLTQLQWIDANASTLQAKVSAAQKSSSSLNSHYAGPESDAAEGFYRSYYG
RR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcacctttggaacccagggctcgtcgagcgctccatcgaataacccgacgact
acagccccggccactggtggtctcttcggaggtgcttcttctggaggcactccctcgttc
tcgttcggctcagctggtggctctaccggcggcaacaacgcaacctcaaacagcgctggt
tccattttcggccagaagtctgccggcgacgcgcagaagcctgcaggcggtttatttggg
ggagctccttcgtcaaacacggcttcaacacccacttctgggggtctgtttggaggagct
tcgacgactccatcaaccagcggtctctttggcggagcaaacaatgcctcctctacgcct
acgtcggcggccccttcctccggaggcttctttggaggagctggcggcgcctctagcaca
acaccggcatctggaggtttgtttggaggttccaacacatcatcgtctaaaccagcttcc
agtggcatgtttggtggtggtggtggctcatcttctggcggcggtctctttggggctcaa
agcagtggtgctcagtctcaaagcacaactacaacatctgcggcaccttcatctggtctg
ttcgcgcaatcaggaagcggcctgttcgggaataaaactggtacaactcccacgacaaac
ccgcagagcacaacaccaacaacggcttccgcagcaacacctgccaaacccatgttttct
ctcccgtcgacgactcctgcgggagctcctccgattgattcatctaagtctgcagctaca
actggaacgaccgctggtggactattcggcggcgcggcaaagtcggctgctccatcaaca
tcagcacctgctgccccagctacctctggacttttcggaggtgctcaatctggagctggc
tcttctgctggcggtctgtttggtaacaaacccgcagctacgactggaggatctgccggt
ggtctctttggggctgcaacaagcaacagcactccggctacttcagcgacatcgggctcc
gcgacagctaccacagggtctgcaggatccatgtttggcgcgaaacccgctgcttctacg
gcatcagcggctccggcttcgacaactacaagcagcgggctttttggtggtggtgctacc
agctctgctaccacgtcttccgcagccccagcaaccgccagcaccgctggaggtttgttc
ggaaacaagccagcggccaccacgactgcatccgcaactcccgcagctactgcgaccgcg
ggtggtctatttggaggtggcacgcaagctgcatcaactgctgcggcagccaaacctgct
tcatctcttttcggtggtgcagctcctgcatcaaccggagcgacgcccgcgccggccgct
tcaacggccggaggtttatttggagctaaaccagcaacagacgcagctagcaaagacaag
gaagagcctaagcctgcggcgcaaaatggcacgacaaatgccctcggcgcatccaccacg
ggtccgacttcgcagatggcaagactgaaaaacaagaccatggaagacattgtcactaga
tgggcttcagatttgaccaaatatcaaaaggagtttaaggagcaggccactacagtttcg
acatgggatcgtagcctggttgacaatggcgaaaagattcagaagctttacctggacact
tttgaggctgagcgagccagtcacgaaattgagcgccaactcgccaccgtagaaagccaa
caagaagaacttgaggcatggctgaatcgctatgaaacagaggtgcaggacatgtttgct
aaacaaattggacccggcgagcagcttgctggtcccgatcaggagcgcgagcgaacatac
aagttggctgaaaaacttacacagcaactggatgaaaagtctagagatctttccaagatg
gttaaggaaataaatgacatttctggtactttaagcaagggagccaagaccgaagatcct
ctgagccagatcgttcgggttctcaacagtcacctcacacaattgcagtggattgatgca
aatgcgtccaccttgcaggctaaggtttccgctgcacaaaagtccagcagctcgctcaac
agtcactatgccggaccggaaagcgatgccgccgaaggcttttaccgatcttactatgga
cgtcgataa
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