Pochonia chlamydosporia: VFPPC_03118
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Entry
VFPPC_03118 CDS
T09407
Name
(RefSeq) WD-repeat protein pop3
KO
K08266
target of rapamycin complex subunit LST8
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04136
Autophagy - other
pchm04138
Autophagy - yeast
pchm04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
VFPPC_03118
04138 Autophagy - yeast
VFPPC_03118
04136 Autophagy - other
VFPPC_03118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_03118
Membrane trafficking [BR:
pchm04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
VFPPC_03118
mTORC2 complex
VFPPC_03118
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
CFAP251_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_WDR41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_NOL10_N
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
DSE1_N
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_Nup120_160
PAC11
ASA1
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_WDR75_2nd
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
B-prop_COPA_B_2nd
NUP82_beta-prop
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_pof12
DmsR_N
Frtz
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
28846654
NCBI-ProteinID:
XP_018147219
UniProt:
A0A179FYI6
LinkDB
All DBs
Position
2:<3380036..>3381207
Genome browser
AA seq
319 aa
AA seq
DB search
MSVILCTAGYDHTIRFWEALSGICSRTIQHPDSQVNRLCISPDKRFLAAAGHHTVKLYDI
KSTNPNPLLTFEGHTGNITGVAFHCEGKWMVTSSEDGTVKIWETRTGSIQRSYNHGSPAN
DVVIHPNQGEIISCDRAGSVRIWDLAENTCAHELVPEEDVPVSSVTVASDGTLLCAANTL
GNVFVWTLRQTYDQTQIMPVTHFNAHKEYITRILLSPDVKKLATCSADHTAKIWEVNNTK
PRDEGEKDPKPFPLEATLTGHQRWVWDCAFSADSAYLVTACSDHYARLWEVHSQQIIRQY
NGHHRGAVCVALNDYSETR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcatcctctgcacagccggatacgaccacacgattcggttctgggaagccctc
tctggcatctgttcacgtaccatccaacatcccgactcccaagtaaatcgactatgcatc
tcccccgacaaaagatttctggcggcagctggtcaccacacggtcaagctatacgacatc
aagtctacgaatcccaatcctcttctcacctttgagggccatactggcaacatcacgggc
gtcgcattccactgcgaaggaaaatggatggtgacaagctccgaagacggcacggttaag
atttgggaaacaaggacaggttctattcagcgaagctacaaccacggctcccccgcaaac
gatgtcgttattcaccccaaccaaggcgaaattatcagctgcgacagggcaggtagtgta
aggatatgggatttagcggagaatacttgcgcgcatgagctggttccagaagaggacgtg
ccagtatcaagcgtcactgttgccagtgatggaaccttgctttgcgcggcaaacacattg
ggaaatgtcttcgtgtggacactgaggcaaacatacgatcaaactcaaatcatgccggta
actcatttcaacgctcacaaagagtacatcactcgcatccttctctcaccagatgtgaag
aaactagcaacatgtagcgccgaccacacagccaagatttgggaggtcaacaacaccaaa
ccccgcgacgaaggcgaaaaggatcccaagcccttccccctggaggctacacttacagga
caccagaggtgggtttgggactgtgcattcagtgccgattcggcatacttggtgacggcg
tgctctgatcactacgcccggctgtgggaggtacacagccagcagattatccgtcagtac
aacggccatcaccgaggcgctgtttgtgttgcgctaaatgattactcggagactcgttag
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integrated database retrieval system