Pochonia chlamydosporia: VFPPC_03243
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Entry
VFPPC_03243 CDS
T09407
Name
(RefSeq) vacuolar protein sorting-associated protein vps13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pchm04131
]
VFPPC_03243
Membrane trafficking [BR:
pchm04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
VFPPC_03243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
Motif
Other DBs
NCBI-GeneID:
28846762
NCBI-ProteinID:
XP_018147384
UniProt:
A0A179FZP0
LinkDB
All DBs
Position
2:complement(3840665..3850349)
Genome browser
AA seq
3206 aa
AA seq
DB search
MLEGLVAGLLNRFLGMYVKNFDPTQLKVGIWSGDVKLRNLQLRREALDQLKLPINVVEGH
LGELTLVIPWSNLRGAPVKVFIEDVFLLASPKEEAEYDEEEEERRRQRLKMEKLDSAELL
KERNREGMSQEEQKKTQSFTQSLVTKIVDNLQVTVKNIHVRYEDSISAPGHPFALGLILE
EFSAVSTDGQWKPTFIQDSDTTTHKLATLGALAVYWNTDSDLFGTGREASSPLKEPMSHD
EMVEKFKSMVGKANALASDHQFILRPVNGRAKIELDKSGDTHAPKFKANLLFEEIGLVLD
DDQYRDALMMVDLFHYFIRHQEYKALKPKGKRPKEDPRAWLLFAGNAVLNKIHDRNRKWS
WDYFKERRDDRLRYIELFKKKKQQQQLTAAESGDLGKLECKLAYEDLRFWRSLARNQLKK
ENAEALRKQPQQPQQQGWVAWMWGSKPQGTIEQNEENTQMTEEQRKELYDMIDWDEKQAL
AEEVDVPREAVKLCLEASLSTGSFTLKKSPHDDPSDLLSLHFDVFKAKALKRKDSVLANV
SLGGLRVNDGTTPDSLYPEIVRVKDAPETRKRKSLSLKELENDKEEPFFQFEIEQNPIER
EGDFAIVGKLKPLEVVWNPNFVVGIVDFFRPPERHMESITALMETAGATVEGIREQTRAG
LEFALEEHKTVNAELDLQAPLIIVPVSITTANSTCLIVDAGHIHVNSELVDNKTMKEIQS
KQRQSYSEADFKRLESAMYDRFIVKLTSTQVLIGPSIEETKKQLVKKSEDSHLHVVEQIN
VDFVVETSILPKAPNLTKLRVSGHLPMLHATVSDSKYKNLMRIIDVAIPKLGQRQQLESS
TENVQKPPQRPRLLSANSARSRRKSQRERRQSSAFPFLQPQTAVILDDIDDDEDDFEDAT
DGVTGERLKIQQRSFEFNFKVDTLKGSLYRSDPDRVKPDTLLVELVAERFDLAFYTRTYD
MAAEVSLGSVVVEDFVENPSGEFKSIVSSGDSEDLKAGRSLVHVKFMKINRQSPEFMPVY
EGVETNITAVVSTINIVVTRKTLLTLLDFILMTFTGGNNEQQAAPVPAVEAAEENDTPQL
DESVVETAKPSENSGSIRVKVDLKAIRLILNNDGIRLATLSFNHGDAGIYVSGKTMRISA
KLGDLSLVDDVNLGVSADSNLRRLVTIQGDDLADFRYETFDSENKKAYPGYDSSIFLRAG
SVKVNFVEEPFRKIIDFLVKFGKMQALYNAARQAAMSRANQIQQSPSKIKFDVVVKTPIV
VFPRLYMPDQEKGDAITAYLGEIYAQNKFVPLDDSEQAVIAMKISAGIRNVRLTSDFHYS
EDRSEELEMIDGVDLGFNITYAEHREGVKRPDTEVEGTLSDIKLRLTQYQLKALMEISKS
VPAAFAGEGDDSDEEAARMVDESTLQRARASPGGGENDADKNLIDLSPELSSLQNAWTKL
DLVFRVNTVGLELIMAEEDEPVGDLGKSGLSRFSLDETKFKTRMLSDGSLEAELVIRSFT
IYDSRRQETKYRRIMTSSNKEAKQLMASVTMSGGKERNLIAMATIDSPRVIFALDYLFAI
QRYVSEGLAVDDTSPMDDESIGETIDESDTDSMQVTYNAPGTERSQSQLSRQRSEMAPTK
SQKPKEESTMSMAFRINLVDAQIILIANPLASNSEAIVLSIRQMLLSKQHALTFQISEVG
MFLCRMDRFDDSRLRIIDDFSIQLNMDSSQVGVSSIHIDVEPLILRLSLRDILLILQIVS
RAGELSGSETKDPAETSAEQKARQLRNAGLKYKSASGRGRSTIAKTRGTKTIAGRTIQQP
AKPQPAAAPNHEELSATIEGVRIVLIGDLHELPILDIGVKEFTATAENWSSNLKAESAID
MYSSVYNFSKSSWEPLLEPWQVGLGVAKDPTSGLISVDVASKKTFDITVTTASIALASKS
LTFLTTEQNVLDKPRGVEAPYRIRNYTGFDVVLHSKSPSSEEPITLRLEDGAEQPWSFEH
WEKMRENLLTESSQNDVGIQLEGSGFDPVKNVRLNREGEFLYSLRPKTENILHRLCVEVS
LGPDNVKNVTLRSPLVVENATEIPVELGVYDAQQGHLLKIEKIAPGDSRPAPVGAVFEKR
ALVRPDGGFGYQWSRDQLWWRDLLQRPTKQIVCQGENGDPFYFQVHARFDRSNPMTKIYP
HMKIKLSAPVTLENLLPYDFKYRIYDKNTKKDWSNFLRKGGVSPVHVVELSHLLLLSIDM
QDTVFKPSDFSIINSGNVEDFRKESRLVVKDDQGLPLNLALHYFKIPNSGGAFKVTVYSP
YVVLNKTGLDLRIRMKSFLQQAKPAAGQFPLVDTSDRERPKALPFMFSYGNDDNRNRALL
KVDESEWSKPQSFDAIGSTSEVVLNSGSKNKEIHVGITVKSGEGKYKMTKVVTLAPRFVL
ENKLGEEILVRESSSSGYMTLEPGALQPLHFMQKSPVKQLCLCYAGVDNHWSSPFNIADI
GTTHVKIAKTGQRQRLVRVEILLEDSTIFLHLSMETKNWPFSMRNESDTEFTFYQANPNV
DEDDVEDRSGWRPIRYRLPPRSIMPYAWDFPAAKFREVVIATGNKERHVKLAEIGNQIPM
KFIATSGQQKIIDINVAADGPTQTLILSNFRQSRSMYKPKALSRTNTGPEAFEVKDQDTG
ATFRAQLKLSGIGISLVNAQLKELAYITFRDVQLRFSDSPLIQTVSLAVKWMQIDNQLYG
GIFPMVLYPSVVPKKANEVDAHPSLHAMVSRVKDDSYGVTYIKYATILLQQMTVEMDEDF
VFALLDFSNVPGASWTMVEEEGKLCDEDLDIPEPSQQQGGQDMYFEVLNIQPMQIDLSFM
RTERINAEDKTSSRNPIMFFLNVMTMAIGNVNDAPIRFNALMLDNVRVSTPVLIQNISNH
YSQEVMYQIHKILGSADFLGNPVGLFNNISSGVTDIFYEPYQGLILSDKPEEFGIGIAKG
AASFAKKTVFGFSDSFSKFTGSLSKGLAAASLDKQFQDRRRITKARNRPKHALTGVTAGA
NSLFTSVASGVGGLARKPLEGAEQEGALGFFKGVGKGVLGLATKPAVGVLDMASNVSEGI
RNTTTVFDGQELDRTRFPRFIPNDGIVRPYNSREAMGQYWLKQVDNGRYFDEQYIGHLEL
PKEDMVVMVTFSRILLIRSKRLTSEWDVPLKDIQTIAKERTGVSLVLRGGANGPFVPVGG
GSERAFLYKMIGIAVEEFNRRFRGGE
NT seq
9621 nt
NT seq
+upstream
nt +downstream
nt
atgttggaaggactcgtcgccggccttctgaaccgcttcttgggcatgtatgtcaagaac
ttcgacccaacacaactcaaagtcggtatctggtctggtgatgtcaagctccgaaacctc
cagctgcgccgcgaggctctcgaccagttgaagctgcccatcaacgttgtggaaggccat
ctgggagagctgacgctggtcattccgtggtccaatctccgtggcgcacctgtaaaggtt
tttatagaagatgttttccttttggcgagcccaaaagaggaagccgaatatgacgaggaa
gaggaggagcgccggaggcagaggctcaagatggagaagctggacagcgcggaattgctt
aaggaacgaaaccgagaaggcatgagccaagaagagcaaaagaagacacaaagcttcacc
caaagtttggtcaccaagattgttgataacctgcaggtcaccgtcaagaacatccacgtg
cgatacgaagattccatttctgcgccaggacatcctttcgcgctgggcttgatattggaa
gagtttagtgccgtcagtaccgatggccagtggaagccgaccttcattcaggactccgat
acgacaacccacaagttggctacccttggtgcattggctgtgtattggaacacagattca
gacctgttcggaactggccgcgaggcgtcctcgccgctgaaggagcccatgtcgcacgac
gaaatggtggaaaagttcaagagtatggttggtaaggctaacgctcttgcctccgaccat
caattcattttgcgacccgtcaacggtcgagcaaagattgaactggacaagtctggcgac
acccatgcgccaaagttcaaagccaatttgcttttcgaggaaatcggtcttgttctggat
gatgatcaatatcgcgacgccctaatgatggtggatttgttccattacttcattcgtcac
caggaatacaaggcgttgaaaccaaaaggaaagcggcccaaggaggatcctcgtgcctgg
cttctctttgctggtaacgccgtcctgaataagatacacgaccgtaaccgcaagtggtca
tgggactatttcaaagagagacgcgacgatcgactgcggtatattgaactgttcaagaag
aagaaacagcagcagcaactcacggcagccgagagcggggatctcggcaagcttgaatgc
aaattggcatatgaggacctccggttctggagatcgttggcgcgaaatcaactcaagaaa
gaaaacgctgaagccttaaggaagcaaccacagcaaccccagcaacaaggctgggtggcc
tggatgtggggatcgaagcctcaaggcacaatagaacaaaatgaagagaacacccaaatg
accgaggaacagcgaaaggagctgtatgatatgattgattgggacgaaaaacaagcactg
gctgaagaggtagatgtcccgagggaggctgtcaagctttgccttgaggcctctctcagc
actggcagttttacattgaagaaaagcccacatgatgatccctccgatctgctgagtctt
cacttcgatgttttcaaggcaaaggctctcaagcgcaaggattccgttctggccaacgtc
agtcttggaggactgcgagttaacgatggtacaacgccggatagcttgtaccctgaaatc
gtccgcgtcaaggatgctcctgagacgagaaaacgaaagagcctgtcgctgaaggagctg
gaaaatgacaaagaagagccgtttttccagttcgaaattgagcagaacccaatagagcgc
gagggcgactttgcgattgtcgggaaactaaaaccgctcgaagtcgtatggaatccaaac
tttgttgtcggtattgtggatttcttccgccctccagaaagacacatggaatccattaca
gctttgatggaaacagccggcgcaactgtcgaaggcatcagggagcagactcgtgcaggg
ctggaatttgctcttgaagaacacaaaaccgtgaatgccgagctggacctgcaggcacct
ctcattatcgtgcctgtgagcattacaacagcgaactcaacctgcttgattgtcgatgct
ggtcatatccacgtcaacagtgaattggttgataacaagaccatgaaggagatccagtcc
aagcagcgacaatcctacagcgaagctgactttaaacgtctcgaatcggcaatgtacgac
agattcattgtcaagctcacatcaactcaagtactcatcggtccgtcaatcgaagaaacc
aagaagcaactggtcaagaagagtgaggattcgcatttgcatgttgtcgagcaaatcaac
gtcgatttcgtcgtcgaaacgtcgattctacccaaagctccaaatctcacgaagctacgg
gtttctggtcatcttcccatgctgcatgcgacagtgtctgactcaaagtacaagaatctc
atgagaatcattgacgtggcaattccaaagttaggacaaaggcagcaattagagtcttca
actgagaatgtccaaaaaccgccacaacgaccacgacttctcagtgccaattcagcacgg
tcacgaagaaagtcccagcgagaacggcggcagtcttcagcattcccatttctgcaaccg
cagacggctgtgatactcgacgacatcgatgacgatgaagatgacttcgaggacgcgaca
gatggagtaacaggggagcggcttaaaatccaacaaaggagcttcgaattcaacttcaaa
gttgatacactcaaaggctcgctttatagaagtgacccagaccgagtcaaaccagacacg
cttctagtagagcttgtggctgaacgattcgacctcgccttctatacgcgaacgtatgat
atggctgccgaagtgtccttaggatccgttgttgtggaggactttgtcgaaaatccctct
ggagagttcaagtctattgtgtcttcgggcgacagcgaagatttgaaagcaggacgaagc
ctcgttcatgtgaagttcatgaagattaatagacagtcacccgagttcatgccagtatat
gaaggggtggaaaccaacatcaccgctgttgtatcaaccatcaacatagttgtcactcgt
aagacgcttctgacgcttttagacttcattctcatgacctttacgggtggcaacaatgag
caacaagctgctccagtacctgcagttgaagctgcggaagaaaatgacacgccacaattg
gatgagagtgttgttgaaaccgcaaagcctagtgagaactccgggtcaatacgtgtcaag
gttgatttgaaagccattcgtctcatactgaataatgatggcatcaggttggcaacacta
tctttcaaccatggcgacgcgggcatctatgttagtgggaagacgatgcgcatctctgct
aaactgggcgatttgtcactagttgatgatgtcaatcttggggtgtcagcggattcaaat
ctccggaggttggttaccattcaaggcgatgaccttgcagacttcaggtacgaaactttt
gattccgaaaacaagaaggcataccccggatacgatagctcgatctttcttcgagctgga
tctgtcaaagtcaactttgtcgaagagccattccgcaagattatcgacttccttgtcaag
tttggcaagatgcaagccttgtataatgctgctcgccaagctgcaatgagtagggcgaat
cagattcagcagagtccgagcaagattaagtttgacgttgttgtgaagacgccaatcgtt
gtatttccgcgtctatatatgcctgatcaagagaaaggagatgccatcaccgcatacttg
ggagagatttatgctcagaataagtttgttccgctagacgatagtgaacaagctgtcatt
gccatgaaaatctcagccggcatacgcaacgtccgcctcacttctgactttcactactcg
gaggaccgatcggaagaactcgaaatgattgacggcgtggatcttggcttcaatattacc
tacgcggaacatagagaaggtgtgaagcgaccggatactgaagtagaggggacactttca
gatatcaagcttcggttgacgcagtatcaactcaaggctctcatggagatctccaagtcg
gttccggctgcttttgctggtgaaggagatgattctgatgaagaagccgcgcgaatggtc
gatgaaagcaccctccagcgcgctagagcctcacctggtggcggcgaaaatgatgctgat
aagaacctgatcgacctttcaccggagctcagttcgttgcaaaacgcctggacgaagctt
gatcttgttttccgcgtcaacactgttggtcttgaactcatcatggcagaggaagatgag
ccggttggcgatctaggcaagtcagggctgtcccgtttctcgctggatgagacaaagttc
aaaacaaggatgctttcggatggttcacttgaagcagaactagtcattcggtctttcacc
atctacgacagccgccgacaagagaccaaataccgacggatcatgacttcttcaaacaag
gaagcgaagcagctcatggctagtgtgacgatgtctggaggaaaggaaaggaacctgatt
gccatggctaccattgacagtccacgagtcattttcgcccttgactatttgttcgcaata
cagagatacgtatccgagggattagctgtggatgacactagcccgatggacgacgaaagt
attggggaaactatcgacgagtccgacaccgattcgatgcaagtcacatacaacgcccct
ggcactgagcgatcacagtcccaactctcacggcaacgcagcgagatggccccaaccaaa
tctcaaaagccaaaagaggagtcaacaatgtctatggcgttccgcatcaatcttgttgat
gctcaaattatcctcattgccaacccactcgcatcaaactcggaggctatagttttgagc
attagacagatgctactttctaaacaacacgcgctcacgttccaaatctcagaagttggc
atgtttttgtgccgtatggacagatttgacgactctcgacttcgtatcattgacgatttc
tccattcaattgaacatggacagctctcaagttggggttagcagcattcatattgacgtg
gagccattgattttgcgcctatcacttcgtgatattcttctgattctgcagattgtcagc
agggcaggtgaactgtctggatcagagactaaggatccagcagagacctcggcggaacag
aaagcaaggcaattacggaatgctggattgaagtacaagtcggccagcggccgaggtcgg
tcaacaattgccaagaccagaggcacaaagaccattgctggtcggactatccagcagccg
gcgaagccacagcctgcagccgcaccgaatcacgaggagctctccgccaccattgaaggc
gtgcgcattgtactgatcggcgatttgcacgaactacccattctggatatcggcgtaaaa
gagtttacagccactgccgaaaattggtcgtcgaatctcaaggcagagtctgcgatcgac
atgtactcgagcgtttacaacttttccaagtctagttgggaaccactcctggagccttgg
caggttggtcttggtgtggcgaaggacccaacctccggactgatatctgtggacgtggca
tcgaagaaaacgtttgatattaccgttactacagcctccatcgcactggcctccaagtca
ttgaccttcctgactacggagcaaaacgtcctagacaagccaagaggagtcgaagctcct
tatcgcatcaggaattatactggtttcgacgtggttctgcactccaagagccctagcagt
gaggagcctataacccttcgacttgaagatggtgccgagcaaccatggagtttcgaacac
tgggagaagatgcgagaaaatcttttgaccgaatctagtcagaatgatgttggcattcag
cttgaagggagcggatttgatcctgtcaagaacgtcagactcaacagagaaggcgaattc
ttgtatagcctgcgccctaaaaccgaaaatatcctacaccgtctttgcgtggaggtcagt
ttaggaccagacaatgtgaagaatgtcacgttgcggtcgccacttgtcgtggagaacgca
acagagataccagttgaacttggtgtttacgatgcccagcagggccatttgctcaagatt
gaaaagattgcgccaggcgactctcgtccagcgcccgttggtgccgtatttgagaaacgt
gctttggtccgacctgacggtggctttggttaccaatggagccgtgatcagctctggtgg
agagatttgttgcagcgaccgaccaagcagattgtgtgtcagggtgaaaatggcgaccca
ttctacttccaggttcatgcccggtttgacagatctaatcccatgacgaagatataccct
catatgaagatcaagttatccgcccctgttaccctcgagaaccttttaccctatgacttc
aagtacagaatttacgacaagaacaccaaaaaggactggtcgaatttcctgcgcaaaggc
ggcgtcagcccagtacatgttgtggaactgtcacacctcctattgttgagcatcgacatg
caagacaccgtcttcaaaccgagtgatttctccatcatcaactctggcaatgtggaggat
ttccgaaaggagagccggctagttgtgaaagatgaccaggggctacctttgaatcttgcg
ttgcattatttcaaaatccccaatagtggaggcgcattcaaggttaccgtctacagtcct
tatgtcgttctcaacaagaccggactcgacctgcgaattcgtatgaagagtttcttgcaa
caagcgaagccggcggcgggtcagttcccacttgttgacacctcagaccgcgagcgacca
aaagcgttgcctttcatgttctcgtatggaaatgacgacaaccgtaaccgagcgttactc
aaggttgacgagtctgaatggagcaaacctcaaagtttcgatgccattggaagcacgtct
gaagttgtcctaaactccggctccaaaaacaaggaaatccatgttggtatcacggtcaaa
tccggcgaaggaaagtacaaaatgacaaaggttgttactctggcccctcgattcgtgctg
gaaaacaaacttggcgaggaaatattggttcgggaatcaagttcatccggctacatgaca
cttgagcctggtgcgttgcaacccttgcactttatgcaaaagtcgccagtcaagcagctc
tgcctttgttacgccggcgtagataaccactggtcgtctccgttcaacatcgccgacatt
ggtacgacgcatgtcaaaatagcaaagactggtcaacgccagagattggtccgagttgaa
attctcctagaggattcaaccatcttccttcacctgagcatggaaaccaagaactggccg
ttctctatgcgcaatgaaagtgacacagagttcaccttctaccaggccaacccgaatgtt
gacgaggacgatgttgaggaccgaagcggttggcggccgatccggtataggttgcctcct
agaagcatcatgccgtatgcgtgggattttccagcggccaaattccgcgaagtggtcatc
gcgacaggcaataaggagcgtcatgtcaagttggctgagattggtaaccagatacccatg
aagttcattgcgacgtctggccagcagaaaattatcgacatcaatgtcgcggccgatggg
ccgacccagacactgattctgagcaattttcgacaaagcagaagcatgtacaagcccaag
gctctttcgagaaccaacacgggcccagaagcattcgaagtcaaggaccaagatacaggt
gcaacattccgagcccagctcaagctgtcgggcattggcatttccttggtcaatgctcaa
ctgaaggagcttgcttacatcacgttcagagatgttcaattgcgatttagcgattcgcca
ctaattcaaacagtatcgcttgctgtgaaatggatgcagattgacaatcaattgtacggt
ggcatcttccctatggtcctgtaccccagtgtggtgccgaagaaggcaaatgaagtggac
gcccatccctcactacatgcaatggtcagccgcgtgaaggacgattcatatggcgtgacc
tatatcaaatatgccaccattctcctccaacaaatgacggtagaaatggatgaggacttt
gtatttgcgctgctggatttctccaacgtgcctggcgctagctggacaatggtggaggag
gaaggcaagctgtgcgacgaggatttggacatcccagaaccctcgcaacaacagggtgga
caagacatgtactttgaggtgctcaacatccagcccatgcagattgacctgagcttcatg
cgaactgaacgcatcaatgcggaagacaagacgtcatcacggaatcccatcatgttcttc
ctcaacgtcatgacgatggccattggaaacgtcaacgatgcgccaattcgattcaacgcc
ctcatgctggataatgtacgagtctcaacaccggtgcttatacaaaacatttcaaaccac
tacagccaagaggttatgtatcagattcacaagattctcgggtctgccgacttcctcggc
aaccccgtgggacttttcaacaacatctcttctggtgtcactgatatcttttacgaaccg
taccaaggccttattctctcagacaagccagaggaatttggcattggtatagcaaagggt
gctgcttcattcgcaaagaagacagtgtttggcttcagtgacagcttctccaagttcact
ggcagtttgagcaaaggtcttgcagcagcatcgctagacaagcaattccaggatcggaga
cgcattacgaaagcaaggaaccggccgaagcatgcacttactggtgtcacagcgggcgca
aattctttgtttacaagtgttgcgtcaggagtgggcggtctagcgagaaagcctcttgaa
ggcgcagaacaagaaggagcgctcggttttttcaagggagtcggaaagggagtacttggt
ctggcaaccaagcctgctgttggtgttttggacatggcgagcaatgtgagcgagggcatt
cgcaatactaccacagtttttgatggtcaggagcttgaccgcacacgattcccacggttt
atccccaatgacggcatcgtgagaccatacaacagccgcgaggcaatgggacagtactgg
ctgaagcaagtcgacaatggacgatactttgacgagcaatatattggacatctggagctg
cccaaggaagatatggtcgtcatggtcacgttttctcgaatactgcttattaggtctaaa
cgactaactagtgagtgggacgtgcctctaaaggatattcagacaatagccaaggagcga
actggcgtgagtcttgtgttgagagggggagcaaatggcccgtttgttccggtcggagga
ggcagcgagagagcgttcttgtacaagatgattggtattgcggtggaagagttcaatcgc
aggttccgaggaggagagtaa
DBGET
integrated database retrieval system
