Pochonia chlamydosporia: VFPPC_03245
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Entry
VFPPC_03245 CDS
T09407
Name
(RefSeq) G-patch domain-containing protein
KO
K13103
tuftelin-interacting protein 11
Organism
pchm
Pochonia chlamydosporia
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pchm03041
]
VFPPC_03245
Spliceosome [BR:
pchm03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
VFPPC_03245
Other components
Complex C specific factors
VFPPC_03245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
TIP_N
G-patch_2
Motif
Other DBs
NCBI-GeneID:
28846764
NCBI-ProteinID:
XP_018147386
UniProt:
A0A179G0T9
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Position
2:<3858627..>3860987
Genome browser
AA seq
786 aa
AA seq
DB search
MSSNGNFQFDPSRLTKAAAAEFSSSASEDEDDYRIPGVAADDDEFGDFNPRKKRRLGKNN
KEKAALGIFGSDSEDDGPGSRWKRKSLRNKGMTFVSTNSKANKSEDEMESEDNKPVLGSW
NNDEDDDGQDDDEEDDDDNTTSGIGLGFGRGLGSTFQRATEDEEDETIKASPPKVKSRFQ
GGGVLGRGFVPSSANEPVLKETVANKEPPQNKPQHSTFTSKGKINAKGFGARMMAKMGYV
QGTGLGKEGQGRNLIIEANLRPQGAGLGAVKEKSEHERREEKRQAELRGEKVIDSDEEEK
KRKRAKKKALGGAAGSGASTPRRQKTKYLTAEELKASAPGLNIPEAFTPILDMTGPGSKM
LTSTSGIMTPTSGVPESTELIEARKLVKRAQADLQAFSEEWRSLEERKTWVNAELEERER
EMEDLRSDFERLQAFSSMIAEQLTVDSDWDLVINCLQKAAELGTANADTADIAVAAVHPF
FRDTEWDPLAEPSKFTPELKRLAPLLMKSQNEGRSVDKWHSNSLQQEGIYRRHQKATTPY
ESMMYKNWLPRVVTAIREWDPLTPSPMLDVVESWNDLLPPFIRAQVMDHVARKLETAVSD
WNPKKKRQSHHLPHTWLFPWLQHLPPYHLDPKGTGLVADVKRKFRQLIDVWEFERGTVPG
LKQWEDVLGSQWRPLIMSHVLPSMGRYLRMNFRVDPADQEPYLPVLTGVMTWNRMLGDTI
IAEVLVQDVFPMWYDKLREWLALGEADLEEVAEWYSWWRGVLLKDMAHVKGVRNELDKGL
QIMNIV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaacggcaactttcagttcgacccgtcgcgtctcacgaaagctgccgccgct
gaattctcgtcttcggcatcagaagacgaggatgactaccgcataccaggcgtggcagcg
gacgacgatgagttcggcgactttaaccccagaaaaaagcggcgactcggcaagaacaat
aaggagaaggctgcacttggtatttttggctccgacagcgaggatgatgggccagggtcg
agatggaaacgaaagtctctccgaaataagggcatgacctttgtttcgacgaattccaaa
gcaaacaaatccgaggacgaaatggaatcagaggataacaagccggtgttgggcagttgg
aataatgacgaagacgacgacggtcaagacgatgacgaagaagacgacgatgacaacaca
acaagtggtattgggttgggctttgggcgcggcctaggctctacattccagcgagccacc
gaagatgaagaagacgagaccataaaagcctctcctccgaaggtgaagtctagattccaa
gggggcggcgtccttggaaggggcttcgtgccatcatccgcgaacgagcccgttttaaaa
gagacggtggcgaataaagaaccacctcaaaacaaaccacagcatagcactttcactagc
aaaggaaaaatcaacgccaaaggctttggagcacgaatgatggctaaaatgggctacgtc
caaggcacaggtctcggtaaagaaggacaaggaagaaacttaatcattgaagcgaatcta
cgacctcaaggtgctggtttgggagccgtcaaggagaaatccgaacatgaacgccgggaa
gagaagcgccaagcggaattacggggcgaaaaggtaatcgattctgatgaagaggagaag
aaacgcaagagagccaagaagaaggctctcggaggtgcagctggcagcggtgctagtact
ccgcgaagacaaaagacgaaatacttgacagctgaagaattgaaagcctcagctccgggc
ttaaatattccagaagcttttacgcccattttggacatgactggacctgggagcaagatg
ctcacatcaacaagcggaatcatgacgccaacatctggtgtgcctgaatcaacagaactg
attgaggcaaggaaattggtcaaacgagcgcaagcagatctccaagctttttctgaagag
tggagaagccttgaggaacgcaagacttgggtcaatgctgaactggaggaaagggaacga
gaaatggaagacctgcggtccgactttgagagactccaagcgttttctagcatgattgct
gaacagctcaccgtggattccgactgggatttagttatcaactgtttgcagaaagcagct
gagcttggtactgccaacgctgacacggcagacattgccgtcgctgcggttcaccctttc
ttccgagacactgaatgggatcctctcgcagaaccgtctaagtttacgccggaactcaag
cgtttagcaccattgctcatgaagtcgcaaaatgaaggtcgctctgttgacaagtggcac
tcgaacagtctgcagcaggaaggcatctatcggagacaccagaaagctacaacaccgtac
gaaagcatgatgtataaaaactggctgccgcgtgttgtcacagcaatccgcgaatgggac
ccgttgacgccgagtccaatgctcgacgtggtagagagctggaacgacctgctcccccct
ttcataagagctcaggtcatggaccatgtagcacggaagcttgagactgcggtttcggac
tggaatcccaaaaagaagcgtcaaagtcaccatctgccgcacacttggctcttcccgtgg
ttacagcacctgcctccgtaccacctagatccaaagggcaccggcctagtggcagacgtc
aagagaaagttccgacagctcattgacgtctgggagtttgagcgcggaacagtacctggc
ctgaagcaatgggaggacgtcttgggcagtcaatggcgaccacttatcatgtctcacgta
cttccatccatgggtcgatacttgagaatgaatttccgtgtcgaccctgcagaccaagag
ccttacctccctgtcctcacaggggtgatgacgtggaatcgcatgcttggtgacaccatt
attgccgaggtgcttgtacaagatgtctttccaatgtggtacgacaaactgcgggagtgg
ttggcccttggcgaagcagaccttgaggaagtggcagagtggtacagctggtggcgtggc
gtgttgttgaaggacatggctcacgtcaagggggtcagaaatgaattggataagggactg
caaattatgaacattgtgtaa
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