Pochonia chlamydosporia: VFPPC_03262
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Entry
VFPPC_03262 CDS
T09407
Name
(RefSeq) F-box and WD domain-containing protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
VFPPC_03262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pchm04121
]
VFPPC_03262
03036 Chromosome and associated proteins [BR:
pchm03036
]
VFPPC_03262
Ubiquitin system [BR:
pchm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
VFPPC_03262
Chromosome and associated proteins [BR:
pchm03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
VFPPC_03262
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
F-box-like
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
WDR55
TRM82_WD
Beta-prop_WDR41
Beta-prop_EML
DSE1_N
F-box
Beta-prop_WDR36-Utp21_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_WDR75_1st
PAC11
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
MgtE_N
Beta-prop_NWD2_C
Beta-prop_pof12
Motif
Other DBs
NCBI-GeneID:
28846777
NCBI-ProteinID:
XP_018147405
UniProt:
A0A179G069
LinkDB
All DBs
Position
2:complement(<3932056..>3935157)
Genome browser
AA seq
1003 aa
AA seq
DB search
MDPFSPAHQPDEGYSEDPLNPTVHQSLPASLATLRSPAELPSWLASNASTLPVSVKKELT
LALLDDLPTSAIAEIVQRLNPRLYIDFVQYLPAEICLKVLGYLDPISLVGVAQTCRAWYE
LALDRKLWERLYYLEGWKAVTSDIAAAENKINSGLTSSIGHLHRIQNADGQTNKIRAILN
DDGDLEMTGTDRRHSGSDNIGIGGSIFGTPGSSFSSHRPVMSPVSGDVDMDASYASNSST
CKGKSVDRSFSSSSDVVRVKRKEPGGTPEPSLPPILPADHPSASMRSTLWSWDVNSSRYR
INWKYLYNMRRRLESNWELGKYTTFQLPHPQFPEEGHQECVYTLQFDADYLVSGSRDQTM
RIWNIRTRRLVRPPLIGHAGSVLCLQFDADPSEDIIVSGSSDSNVFIWKFSTGELIQKIT
KAHRESVLNVRFDKRILVTSSKDKTIKIFNRRPLRFGELGYGSADAAFSAAGKTVKRYGY
EPDLAQELPLKEPYTMIGRLEGHGAAVNAIQVRDRTIVSVSGDRHIKVWDWPDQVCTQTI
PAHDKGIACVEFDGRRIVSGSSDYEVCIFDAPTGLKVAQLRGHAHLVRTVQAGFGDLPYS
KIEDELEAKNVDAEYFKAVEAGEVAREGERRNRRTRRVNAGSSRPTDVQAFGAKVPPGGG
GGRKYGRIVSGSYDQSIIIWRRDKEGVWKPAHHLRQEEAAAAAQQHMAMAAPPQSTQQPG
LGAHPQGSLPMHPSVRPTILHASGSRNRPQPPGEMGPVDGESSGSGSGTGQGTSGLYMNL
IDQVVPLGARALEQAIANYPAVLSHHNYLQSVIEREPSPLIRTQLRQAITAALVSFQTGQ
QPARQRPVSALNNATGQVEAPDGGFSVAGPSNAPATPGMSQPASMSTPRATQAVPGPSAA
SAIYIAPDVNMTTAATPLPVPLPTPTPAPAQPAQVPTPHTAPPPAHHHPHIAAAENAPAR
VFKLQFDARKIVCCSQAPVIVGWDFCNGDPELEETARYFATVD
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggaccccttctcgccagcgcatcaacccgatgagggctactccgaggatcctttgaat
cccactgttcatcagagcctacctgcgagcttggccactctgcgatcgccagctgagctg
ccatcatggctggcaagcaatgcctcgaccttgcctgtctctgtgaagaaagaattgaca
ctcgcactcctcgatgatcttcctacctccgccattgctgaaatcgtccagcgtctaaac
cctcgattatacatcgattttgtccaatatcttccggccgaaatctgtctcaaagtactg
ggctatcttgaccctatatcattagttggcgtcgcccaaacatgtcgagcgtggtacgag
ttggctctggatagaaaactctgggagagactatactatcttgaaggatggaaagctgtt
acgagtgatattgcagccgcagagaacaaaatcaactctggcttaaccagctccatcggc
catttgcatcggatccaaaatgctgatggtcaaaccaacaagattcgagctatcctaaat
gacgatggagacttggaaatgaccgggaccgatcggcgacacagcggatcggataacata
ggcattggtggtagcattttcgggacacccggctcatcattctcgtctcatcggccagtc
atgtcacctgtgagcggtgatgttgacatggatgcgagctatgcctcaaattcatcaacg
tgcaagggcaaaagcgttgacagaagttttagctcctcgtcagatgtcgttcgtgttaag
cggaaagaaccagggggaacaccagagccgtctttgcctccgattcttccagcagatcat
ccgagtgcttcgatgcgatcaactttgtggtcttgggacgtcaacagctcgaggtatcgc
atcaactggaagtatctctacaacatgcgacgaaggctcgagtccaattgggaacttggc
aaatacacgacatttcagttgccgcacccacaatttcccgaagaaggacatcaggaatgt
gtctacacattacaatttgatgccgattatttggtcagcggtagcagggaccaaaccatg
cgcatatggaatattcgaacccgtcgcttggttcggccacctctgattggacatgctggc
tcagtcttgtgtcttcagtttgacgccgacccctccgaggacattattgtttccgggagc
agtgactccaatgtcttcatctggaagttttcgactggcgagctgattcaaaaaattact
aaggcgcatcgcgagtcagttcttaatgttcgctttgataagcggattcttgtcacgtct
tcaaaagacaaaactattaaaatttttaatagaagacctcttcgctttggagagctggga
tatggctcggccgatgcagccttcagtgcggcaggcaagactgtcaaacgctacggatat
gaaccagatctagcacaggaacttcctcttaaggagccgtataccatgattgggcgctta
gagggccacggcgccgccgtgaatgccatccaagtcagagatcgtaccattgtttccgtc
tctggagacaggcatatcaaggtttgggattggccagatcaagtgtgtacccaaactatc
cccgctcacgataagggcattgcgtgtgtcgagtttgatggacgacgaattgtgagcggc
agcagcgattatgaagtgtgtatttttgatgccccgacgggtctcaaggttgcacaactg
cgtggccacgcacaccttgtgagaactgtacaagccgggtttggcgacctgccctacagc
aagatcgaagacgagttagaagccaagaatgtcgatgccgagtacttcaaggctgtcgaa
gctggtgaggttgctcgcgaaggtgaaaggcggaaccgaaggacgaggagagtgaatgcc
ggaagctctaggccaactgatgtacaggcatttggagccaaggtgccacctggaggagga
ggcggtcgaaagtatgggcgaattgtttctgggtcctacgaccagagcattattatatgg
agacgagacaaagaaggtgtctggaaaccagcacatcatcttcgtcaggaggaggcagca
gcggccgcacagcaacatatggcgatggcagcaccaccgcaatctacccagcaaccgggg
ttgggtgctcaccctcagggcagcctcccaatgcacccctctgttcgcccgacgatcctt
catgcatctggctctcgcaacagacctcagcctcctggcgagatgggtccggtggatgga
gaatccagtggcagtggcagtggcaccggtcaaggaacctccgggctctacatgaatttg
attgaccaggtcgtgcctctgggtgcacgagcattggagcaggcaatagccaactaccca
gccgtattgagtcatcacaactacctgcagtccgtcattgaacgtgagccgtcgccgttg
atccgcacgcagcttcgacaggcgatcacagcggcgttggtctccttccaaacgggacaa
caacccgcgagacagcgaccggtgagtgcgttgaacaacgctactggccaggtagaggcg
ccagatggcggcttctctgtggctggcccgagcaacgctcctgcgacaccaggcatgtct
caacccgcaagcatgtccactcccagagcgactcaagctgttcctgggccatcagcagca
tctgcaatctatatagcaccggatgtgaacatgacgactgctgcaacacccctaccggtt
cctctaccgactcctacgccagcgccagcgcaaccagcccaagtgccgacaccacatacc
gctccgccaccagcacatcaccaccctcacatcgccgcggcagagaatgcacctgcccgc
gttttcaagcttcagtttgatgctcgcaagatcgtgtgctgtagtcaagcgccagttatt
gtgggctgggacttttgcaacggagaccctgagcttgaggagactgctcgatacttcgct
actgtagattag
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