Pochonia chlamydosporia: VFPPC_03383
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Entry
VFPPC_03383 CDS
T09407
Name
(RefSeq) small nucleolar ribonucleoprotein complex component (Utp5)
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
pchm
Pochonia chlamydosporia
Pathway
pchm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pchm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VFPPC_03383
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pchm03009
]
VFPPC_03383
Ribosome biogenesis [BR:
pchm03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
VFPPC_03383
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Utp12
Motif
Other DBs
NCBI-GeneID:
28846886
NCBI-ProteinID:
XP_018147553
UniProt:
A0A179FZB5
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Position
2:complement(<4340282..>4341475)
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AA seq
397 aa
AA seq
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MSTKRKVPAKLAAPVVKSAAKLPTKNTIDESRTSVAAPDVVQGSQVETIEISSDSASDEE
FTDEEDAAAVEQTNGDKPPLKAPVVTKLNGKPKNDDAEAEESDEEGTSPSFGELLRGNDA
IDVPALLQQSMSGTVTTQPARTAIVPPSHQSLTTVLTQALKTDDTELLESCLHTPDVTTV
RNTIETIDSSLAGILLNKLAARLYRRPGRAGNLMAWVQWTLIAHGGALASQPKVVHSLNN
LQKVLAERAKGLNSLLALKGKLDMLELQMRLRRKMQRQTGLVGPGDDAEEDDDVIWVEGE
TDPISRKDLANGGRSRRDDDEDDDVPMINGIGDSEDEEEDSDVQEDDDSEAAEESLDEDE
VDHEDVDDSAGEEEESDAEAAPPSKMQKVGKSFSKRK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaagcgaaaagtgccagccaagctggctgcgccggttgtaaaatcggccgca
aaactccccacaaagaacaccattgacgaatctcggacatccgtcgccgcacctgacgtc
gtccaaggctcgcaggttgaaaccattgaaatctcctctgattccgccagcgacgaggag
tttaccgacgaagaagacgccgccgcggtagaacagaccaatggcgataaaccgccgctc
aaggcacccgtcgtgaccaaattaaacggcaagcctaaaaatgacgatgcggaagcagaa
gagtctgacgaggaaggaacatcaccatcattcggcgagctcttacgaggaaacgacgcc
atcgatgttccagccctccttcagcaatccatgtcaggaaccgtgacgacacaacccgcc
cgaacggccattgtgccaccctctcaccaatctctcaccactgtcttgacacaggctcta
aaaacggacgacaccgaactcctcgaatcatgcttgcacaccccagatgtcaccaccgtc
cgaaataccatcgaaacaatagacagctccctcgccgggattctcctcaacaagctcgcc
gcccggttatatcgccggcccggccgcgccggaaatctcatggcctgggtgcaatggacg
ctcatcgcacacggcggcgcactggcatcacagcccaaagtcgtacacagtctgaataac
ctgcagaaggtgctggcagagcgagccaaggggctgaacagtctcctcgcgctcaagggt
aaactcgacatgctggaactgcaaatgaggctacggcgcaagatgcaacgacaaactggc
ctcgtggggcctggcgacgacgctgaggaggatgacgatgttatctgggtggagggcgag
acggaccccattagcaggaaggacctcgctaatggcggtaggtcaagacgggatgatgat
gaggatgatgatgttcccatgattaatgggattggagattcggaagacgaggaggaggat
tcggatgtgcaggaggatgatgatagtgaagcggcggaggagtcgttggacgaagatgaa
gttgatcacgaggatgtagatgattcagcgggcgaagaggaagaaagtgatgctgaggca
gcgccgccttcaaaaatgcagaaagtaggcaagtcgttttcaaagaggaaatga
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