KEGG   Pochonia chlamydosporia: VFPPC_03503
Entry
VFPPC_03503       CDS       T09407                                 
Name
(RefSeq) DNA repair helicase RAD3
  KO
K10844  DNA excision repair protein ERCC-2 [EC:5.6.2.3]
Organism
pchm  Pochonia chlamydosporia
Pathway
pchm03022  Basal transcription factors
pchm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pchm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    VFPPC_03503
  09124 Replication and repair
   03420 Nucleotide excision repair
    VFPPC_03503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pchm03021]
    VFPPC_03503
   03036 Chromosome and associated proteins [BR:pchm03036]
    VFPPC_03503
   03400 DNA repair and recombination proteins [BR:pchm03400]
    VFPPC_03503
Enzymes [BR:pchm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     VFPPC_03503
Transcription machinery [BR:pchm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     VFPPC_03503
Chromosome and associated proteins [BR:pchm03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    VFPPC_03503
DNA repair and recombination proteins [BR:pchm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     VFPPC_03503
SSDB
Motif
Pfam: HBB DEAD_2 Helicase_C_2 GARP
Other DBs
NCBI-GeneID: 28846991
NCBI-ProteinID: XP_018147694
UniProt: A0A179G0D5
LinkDB
Position
2:4771298..4773716
AA seq 716 aa
MSEIEKALVELKSLMKYRAGQLGYDEDFRGLGLTSRKNLCLHPSVKREKSGSIVDARCRS
LTAGFVKEKKDRGESVDVCVYHDNLDLLEPHSLIPNGVWTFDDILRYGEEHKQCPYFTAR
RMMQYCNVVIFSYHYLLDPKIAERVSRDFSKDCIVVFDEAHNIDNVCIEALSTDITEDSL
RRASRGAQNLEHKITEMRDTDQEQLQNEYQKLVQGLREADEARQEDAFMANPALPEDLLK
EAVPGNIRRAEHFVAFLRRFIEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCA
ERLTSLVRTLELTNVEDYQPLQEVATFATLVATYEKGFLLILEPYESDTAEVPNPILHFT
CLDAAIAIRPVFERFYSVIITSGTISPLEMYPKMLDFSTVIQESYSMTLARRSFLPMIVT
RGSDQASISTSFQVRNEPSVVRNYGSLLIEFAKITPDGLVVFFPSYLYMESIISMWQGMG
ILDEVWKYKLILVETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGR
TVLCIGVPFQYTESRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGI
MVLADRRFQKKRTQLPKWINQGLLDVDANLSTDMAVSSARRFLRTMAQPFHAKDQEGIST
WDYEDLQRHKERADVEKIRELEDAAKDLGSQNIAALNNSEFDDEELDQDMMELDDF
NT seq 2151 nt   +upstreamnt  +downstreamnt
atgtcagagatcgaaaaggccttagtagaactgaagtctcttatgaaataccgtgctggc
cagcttggctatgatgaagattttcgcggcttgggattgactagtcgaaagaacctatgc
ctccatccatcagtaaaaagagaaaagagtggatctattgtggacgcccgttgtcggagc
ctcactgctggctttgtcaaagagaagaaggataggggtgagagtgtggacgtttgtgta
taccatgataatctcgaccttctcgaaccccatagcctgattccaaatggcgtttggact
ttcgacgatattttacgatatggagaagaacacaagcagtgcccatattttactgcaaga
cggatgatgcaatactgcaatgtcgtcattttctcatatcactatcttcttgacccgaaa
attgcggagcgagtatctcgagatttttccaaggattgcattgttgtctttgatgaagct
cacaatattgacaatgtatgcatcgaggcccttagtactgacatcacagaagactcgctg
cgcagggccagcagaggggcacaaaatctcgagcacaaaatcactgaaatgcgggacacg
gatcaagaacagcttcagaatgaatatcaaaaattggttcaaggcttgcgtgaagcggat
gaagctcgccaagaagatgcttttatggcgaaccctgctctgccagaagatcttttgaaa
gaagctgtgcctggaaatatcaggagagcggagcattttgttgccttcctccgaagattc
attgaatacctcaagacgagaatgaaagtgcgacaggtcatttcagagactccaccctct
ttccttgcacatttgaaggaacataccttcattgaaaagaagcctctgaggttctgtgcc
gaacgcttgacgtcgcttgtgcggacgctcgagcttaccaacgttgaggactaccagcca
ctgcaagaagtagctacttttgcaaccctggttgcaacctatgagaaggggttcttactt
atacttgagccctatgaatcagatacggcagaggttcccaaccctattcttcattttacc
tgccttgacgccgcaattgccattcgcccggttttcgaaagattctattctgttatcata
acttctgggaccatttctcctctagaaatgtatccgaaaatgctggacttttcgacagtg
attcaagagtcatatagtatgacactggcgaggcgatctttcttgcccatgattgtaaca
cggggcagtgatcaagcctccatctcgaccagctttcaggttcgtaacgaaccaagtgtg
gtccgaaattacggaagtctcttgattgagttcgccaaaatcacacccgatggcctagtt
gtctttttcccatcatatctatatatggaatccattataagcatgtggcaagggatgggt
atcctcgatgaggtttggaaatacaaacttattttggtagaaacgccagatgctcaggaa
acatccttagcccttgaaacctatcgcactgcttgctgtaacggcagaggggcgatccta
ctatgtgtggcgcgaggaaaagtctcagagggcattgattttgatcaccagtatggtcga
acggtactttgcatcggcgtgccgtttcaatatacggaatcccgaattttgaaggctcgt
ctcgaattcttgcgagagacatatcgtattaaggaaaacgacttcctttcattcgacgcc
atgcgccatgctgcgcaatgtcttgggcgtgtgctacgaggaaaggatgactacggaatc
atggtccttgccgaccgccgattccaaaaaaaaaggacgcaattgcccaaatggattaat
caaggccttctggatgttgacgcgaatctcagcacagacatggcggtgagtagtgcaagg
cggtttctgcgaaccatggcacaaccatttcatgccaaggatcaagaaggtattagcact
tgggattacgaagatcttcaaaggcacaaggaaagagctgatgtagagaagattcgtgaa
cttgaagacgcagcaaaggatctgggatcccagaatattgctgcacttaataactccgaa
tttgatgacgaagagctagaccaagatatgatggagctggacgacttctag

DBGET integrated database retrieval system